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qs_4_scaffold_1111

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1111_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..1626
DNA (1626bp) protein (542aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=1227457 species="Archaea; Euryarcha
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1S6_9EURY
qs_4_scaffold_1111_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1852..2871)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHH5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60986.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
putative drug/metabolite exporter family protein permease
qs_4_scaffold_1111_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3055..3348)
DNA (294bp) protein (98aa)
thioredoxin reductase (EC:1.8.1.9)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKF7_9EURY
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EMA45863.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
qs_4_scaffold_1111_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3309..3608)
DNA (300bp) protein (100aa)
thioredoxin reductase (EC:1.8.1.9)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHL4_9EURY
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ELZ22790.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
qs_4_scaffold_1111_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3705..4190)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEL8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43104.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
cyclase/dehydrase
qs_4_scaffold_1111_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4966..6672
DNA (1707bp) protein (569aa)
Phosphoesterase RecJ domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEJ9_9EURY
Phosphoesterase RecJ domain-containing protein {ECO:0000313|EMBL:EMA44187.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
phosphoesterase RecJ domain-containing protein
qs_4_scaffold_1111_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6925..7476
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFN6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44188.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
CBS/parB domain-containing protein
qs_4_scaffold_1111_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7635..7901
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0N0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38968.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
qs_4_scaffold_1111_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7927..8232
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0N0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38968.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
pyridoxamine 5-phosphate oxidase
qs_4_scaffold_1111_10
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8520..10223
DNA (1704bp) protein (568aa)
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PGB7_9EURY
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:EMA68943.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidi
qs_4_scaffold_1111_11
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10336..10770
DNA (435bp) protein (145aa)
DNA polymerase beta domain protein region n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NT43_HALUD
DNA polymerase beta domain protein region
DNA polymerase beta domain protein region {ECO:0000313|EMBL:ACV12118.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabd
qs_4_scaffold_1111_12
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11478..13463
DNA (1986bp) protein (662aa)
Acetate/CoA ligase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LNG0_HALLT
Acetate/CoA ligase {ECO:0000313|EMBL:ACM56898.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain ATCC
acetate/CoA ligase
qs_4_scaffold_1111_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13716..15086
DNA (1371bp) protein (457aa)
Putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU95_9EURY
Putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein {ECO:0000313|EMBL:EMA49312.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
livK1; branched-chain amino acid ABC transporter amino acid-binding protein
qs_4_scaffold_1111_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15280..16251
DNA (972bp) protein (324aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIC5_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA44195.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
livH; ABC-type branched-chain amino acid transport system, permease I
qs_4_scaffold_1111_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16391..17542
DNA (1152bp) protein (384aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEP3_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA44196.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
livM1; putative branched-chain amino acids ABC transporter permease
qs_4_scaffold_1111_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17542..18300
DNA (759bp) protein (253aa)
ABC-type branched-chain amino acid transport system, ATP-binding protein I n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEL0_9EURY
ABC-type branched-chain amino acid transport system, ATP-binding protein I {ECO:0000313|EMBL:EMA44197.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
qs_4_scaffold_1111_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18297..19040
DNA (744bp) protein (248aa)
Putative branched-chain amino acids ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFP4_9EURY
Putative branched-chain amino acids ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA44198.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
livF1; putative branched-chain amino acids ABC transporter ATP-binding protein
qs_4_scaffold_1111_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19044..19808
DNA (765bp) protein (255aa)
Thioredoxin n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU89_9EURY
Thioredoxin {ECO:0000313|EMBL:EMA49307.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
trxA4; thioredoxin
qs_4_scaffold_1111_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20104..20508)
DNA (405bp) protein (135aa)
Universal stress protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MID1_9EURY
Universal stress protein {ECO:0000313|EMBL:EMA44200.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
usp; stress response protein-like protein
qs_4_scaffold_1111_20
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20929..22542
DNA (1614bp) protein (538aa)
AMP-dependent synthetase and ligase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WWW7_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELY53686.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobiu
AMP-dependent synthetase and ligase
qs_4_scaffold_1111_21
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22642..23184)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1PVG3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG96381.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein containing DNA repair Rad51 / transcription factor NusA, alpha-helical domain
qs_4_scaffold_1111_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23780..24046)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWU1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49304.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_1111_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24400..26274)
DNA (1875bp) protein (625aa)
coxA1; cox-type terminal oxidase subunit I (EC:1.9.3.1)
Cytochrome C oxidase subunit I n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFP8_9EURY
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:EMA44203.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
qs_4_scaffold_1111_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26451..26885)
DNA (435bp) protein (145aa)
Cox cluster protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LY88_9EURY
Cox cluster protein {ECO:0000313|EMBL:EMA38138.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
cox cluster protein
qs_4_scaffold_1111_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27009..27407)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MID5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44205.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_4_scaffold_1111_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27524..29641)
DNA (2118bp) protein (706aa)
DEAD/DEAH box helicase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBH5_9EURY
DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:EMA54918.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
DEAD/DEAH box helicase domain-containing protein
Displaying 26 items

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