ggKbase home page

qs_4_scaffold_1141

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1141_1
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..173
DNA (171bp) protein (57aa)
Cation transporter n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CCH7_9EURY
potassium transporter Trk
Potassium transporter Trk {ECO:0000313|EMBL:AHG01720.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-4
qs_4_scaffold_1141_2
unknown

Not on your lists

688..819
DNA (132bp) protein (44aa)

This feature has no annotations

qs_4_scaffold_1141_3
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(885..1859)
DNA (975bp) protein (325aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BG98_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:ERI71195.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
NADH-dependent dyhydrogenase
qs_4_scaffold_1141_4
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2053..3060
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X576_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY56601.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
qs_4_scaffold_1141_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3299..3991
DNA (693bp) protein (231aa)
Molybdopterin binding domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR11_9EURY
Molybdopterin binding domain-containing protein {ECO:0000313|EMBL:ELZ24324.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
cinA1; CinA N-terminal domain protein
qs_4_scaffold_1141_6
unknown

Not on your lists

comp(4508..4648)
DNA (141bp) protein (47aa)

This feature has no annotations

qs_4_scaffold_1141_7
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4819..5904
DNA (1086bp) protein (362aa)
ATP-NAD/AcoX kinase n=1 Tax=Halobacterium sp. DL1 RepID=G4IFF7_9EURY
N-acetylglucosamine-1-phosphate uridyltransferase {ECO:0000313|EMBL:AHG03584.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source=
hypothetical protein
qs_4_scaffold_1141_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6083..7072
DNA (990bp) protein (330aa)
Transport system regulatory protein ( substrate phosphate) n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPJ6_9EURY
Transport system regulatory protein ( substrate phosphate) {ECO:0000313|EMBL:ELZ24322.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
regulatory protein
qs_4_scaffold_1141_9
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7255..7518)
DNA (264bp) protein (88aa)
Deoxyribodipyrimidine photolyase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JBL6_HALJB
deoxyribodipyrimidine photolyase
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:ADJ16669.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccu
qs_4_scaffold_1141_10

Not on your lists

comp(7769..9154)
DNA (1386bp) protein (462aa)
deoxyribodipyrimidine photo-lyase (EC:4.1.99.3)
Deoxyribodipyrimidine photo-lyase family protein (Cryptochrome) n=1 Tax=uncultured archaeon A07HR60 RepID=V4YJY3_9ARCH
Deoxyribodipyrimidine photo-lyase family protein (Cryptochrome) {ECO:0000313|EMBL:ESS11747.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
qs_4_scaffold_1141_11
unknown

Not on your lists

comp(9151..9408)
DNA (258bp) protein (86aa)

This feature has no annotations

qs_4_scaffold_1141_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9788..10807)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKW2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45060.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_4_scaffold_1141_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11037..11228
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NH42_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55965.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_4_scaffold_1141_14
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11476..11712
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XK00_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY62094.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
qs_4_scaffold_1141_15
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11796..12269
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MUT4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42375.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_4_scaffold_1141_16
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12356..12748)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XDR3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY58773.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
qs_4_scaffold_1141_17
unknown

Not on your lists

13408..13644
DNA (237bp) protein (79aa)

This feature has no annotations

qs_4_scaffold_1141_18
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13822..15384
DNA (1563bp) protein (521aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AIW3_NATA1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HA
phosphoglycerate mutase
qs_4_scaffold_1141_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15530..15898)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6G5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40983.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
NifU-like domain-containing protein
qs_4_scaffold_1141_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16659..17981
DNA (1323bp) protein (441aa)
Magnesium transporter accessory protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNU0_9EURY
Magnesium transporter accessory protein {ECO:0000313|EMBL:EMA50670.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
magnesium transporter accessory protein
qs_4_scaffold_1141_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18112..19488
DNA (1377bp) protein (459aa)
Aminotransferase class-III n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM39_9EURY
Aminotransferase class-III {ECO:0000313|EMBL:EMA45804.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
aminotransferase class-III
qs_4_scaffold_1141_22
unknown

Not on your lists

19615..19749
DNA (135bp) protein (45aa)

This feature has no annotations

qs_4_scaffold_1141_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20185..21726
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDH6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42719.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_4_scaffold_1141_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21937..22992)
DNA (1056bp) protein (352aa)
Chloromuconate cycloisomerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKQ4_9EURY
Chloromuconate cycloisomerase {ECO:0000313|EMBL:EMA44995.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
enolase
qs_4_scaffold_1141_25
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22989..24065)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BPA3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ12133.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
hypothetical protein
qs_4_scaffold_1141_26
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24289..25638
DNA (1350bp) protein (450aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VZJ2_DESAS
iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:ACV64937.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum
qs_4_scaffold_1141_27
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25743..25994)
DNA (252bp) protein (84aa)
Uncharacterized protein id=24625438 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Uncharacterized protein {ECO:0000313|EMBL:ERG97629.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.;
qs_4_scaffold_1141_28
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26113..27072)
DNA (960bp) protein (320aa)
Probable cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Ru
Probable cyclic pyranopterin monophosphate synthase n=1 Tax=Halogranum salarium B-1 RepID=J3A1A2_9EURY
molybdenum cofactor biosynthesis protein A
qs_4_scaffold_1141_29
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27347..28156
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JN29_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09075.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_4_scaffold_1141_30
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28301..28579
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9A4_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16373.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
Displaying items 1-30 of 40 in total

View Taxonomy