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qs_4_scaffold_1143

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1143_1
unknown

Not on your lists

comp(288..392)
DNA (105bp) protein (35aa)

This feature has no annotations

qs_4_scaffold_1143_2
unknown

Not on your lists

comp(558..689)
DNA (132bp) protein (44aa)

This feature has no annotations

qs_4_scaffold_1143_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

929..2353
DNA (1425bp) protein (475aa)
Sugar phosphate permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N455_9EURY
Sugar phosphate permease {ECO:0000313|EMBL:EMA52646.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
putative sugar transporter
qs_4_scaffold_1143_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2504..2923)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6B4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41241.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
Protein of unknown function (DUF3054)
qs_4_scaffold_1143_5
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3161..4837)
DNA (1677bp) protein (559aa)
Fe-S oxidoreductase n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0I713_9EURY
Fe-S oxidoreductase {ECO:0000313|EMBL:ELZ91797.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;"
Fe-S oxidoreductase
qs_4_scaffold_1143_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5468..5794)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M494_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40627.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
DUF1486 family protein
qs_4_scaffold_1143_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6113..7294
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PM60_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ05320.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qs_4_scaffold_1143_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7417..8049
DNA (633bp) protein (211aa)
3-beta hydroxysteroid dehydrogenase/isomerase n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WVI7_HALHL
3-beta hydroxysteroid dehydrogenase/isomerase
putative NADH-flavin reductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
qs_4_scaffold_1143_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8180..8572)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QMU7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93742.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
HxlR family transcriptional regulator
qs_4_scaffold_1143_10
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8654..9310)
DNA (657bp) protein (219aa)
NmrA family protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EQE2_9EURY
NmrA family protein {ECO:0000313|EMBL:ELZ49112.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;"
NmrA family protein
qs_4_scaffold_1143_11
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9851..10054
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IF91_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ94119.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
qs_4_scaffold_1143_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10326..11417
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGY5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44982.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_4_scaffold_1143_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11493..12461
DNA (969bp) protein (323aa)
apl; AP-endonuclease/AP-lyase (EC:3.1.21.2 4.2.99.18)
AP-endonuclease/AP-lyase/xylose isomerase domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGZ3_9EURY
AP-endonuclease/AP-lyase/xylose isomerase domain-containing protein {ECO:0000313|EMBL:EMA44981.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
qs_4_scaffold_1143_14
unknown

Not on your lists

12597..12851
DNA (255bp) protein (85aa)

This feature has no annotations

qs_4_scaffold_1143_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13280..13531)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92702.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_4_scaffold_1143_16
Haloterrigena sp. H13, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13582..13842
DNA (261bp) protein (87aa)
Transcriptional regulator AbrB family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPT5_9EURY
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:KDD77942.1}; TaxID=1416969 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena s
looped-hinge helix DNA binding domain, AbrB family
qs_4_scaffold_1143_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13873..14856)
DNA (984bp) protein (328aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
fen1; DNA repair flap endonuclease Fen1 (EC:3.-.-.-)
Flap endonuclease 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHD8_9EURY
qs_4_scaffold_1143_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15723..16361)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJY1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44765.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_4_scaffold_1143_19
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16541..17680)
DNA (1140bp) protein (380aa)
Class I and II aminotransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MQT6_HALMO
Class I and II aminotransferase {ECO:0000313|EMBL:EMA47713.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae
aspartate/tyrosine/aromatic aminotransferase
qs_4_scaffold_1143_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17832..18332)
DNA (501bp) protein (167aa)
Transcriptional regulator, AsnC family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHJ0_9EURY
Transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:ELZ22765.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halo
leucine responsive regulatory protein
qs_4_scaffold_1143_21
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18617..19291
DNA (675bp) protein (225aa)
GCN5-related N-acetyltransferase n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NHK2_9EURY
Mycothiol acetyltransferase {ECO:0000313|EMBL:CQR53673.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
wecD; acetyltransferase
qs_4_scaffold_1143_22
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19525..20124)
DNA (600bp) protein (200aa)
GCN5-related N-acetyltransferase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LPZ4_HALLT
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACM57432.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofund
qs_4_scaffold_1143_23
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20261..21880
DNA (1620bp) protein (540aa)
Replication factor C large subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N3D1_9EURY
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256
ATPase AAA
qs_4_scaffold_1143_24
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22314..23396
DNA (1083bp) protein (361aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Halogranum salarium B-1 RepID=J3A1U4_9EURY
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:EJN59293.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.
alcohol dehydrogenase GroES domain-containing protein
qs_4_scaffold_1143_25
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23440..24243)
DNA (804bp) protein (268aa)
glnQ; ABC-type glutamine/glutamate/polar amino acids transport system, ATP-binding protein (EC:3.6.3.21)
Putative glutamine ABC transporter ATP-binding protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J8Y5_9EURY
Putative glutamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA04185.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Ha
qs_4_scaffold_1143_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24240..25079)
DNA (840bp) protein (280aa)
ABC-type glutamine/glutamate/polar amino acids transport system, permease protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPY7_9EURY
ABC-type glutamine/glutamate/polar amino acids transport system, permease protein {ECO:0000313|EMBL:EMA46505.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
glnP; ABC-type glutamine/glutamate/polar amino acids transport system, permease protein
qs_4_scaffold_1143_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25139..25624)
DNA (486bp) protein (162aa)
ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP63_9EURY
ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein {ECO:0000313|EMBL:EMA46504.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
ABC transporter periplasmic subunit
Displaying 27 items

View Taxonomy