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qs_4_scaffold_1158

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1158_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..331)
DNA (330bp) protein (110aa)
DNA binding domain-containing protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4E4_HALJB
DNA binding domain-containing protein
DNA binding domain-containing protein {ECO:0000313|EMBL:ADJ13506.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkali
qs_4_scaffold_1158_2
unknown

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343..582
DNA (240bp) protein (80aa)

This feature has no annotations

qs_4_scaffold_1158_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1016..2074)
DNA (1059bp) protein (353aa)
Integrase family protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ13_9EURY
Integrase family protein {ECO:0000313|EMBL:EFW90429.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
integrase family protein
qs_4_scaffold_1158_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2076..2561)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNK5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24213.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_1158_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2862..3584)
DNA (723bp) protein (241aa)
Integrase family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=L9VE32_HALJB
Integrase family protein {ECO:0000313|EMBL:ELY35465.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotga
integrase family protein
qs_4_scaffold_1158_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4320..4553
DNA (234bp) protein (78aa)
2-haloalkanoic acid dehalogenase, type II n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZB9_9EURY
2-haloalkanoic acid dehalogenase, type II {ECO:0000313|EMBL:EMA37714.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
haloacid dehalogenase, type II
qs_4_scaffold_1158_7
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4786..4962
DNA (177bp) protein (59aa)
Haloacid dehalogenase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X6T7_9EURY
Haloacid dehalogenase {ECO:0000313|EMBL:ELY56323.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 1
haloacid dehalogenase, type II
qs_4_scaffold_1158_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5043..5195)
DNA (153bp) protein (51aa)
Regulatory protein Crp n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NEY3_9EURY
Regulatory protein Crp {ECO:0000313|EMBL:EMA56411.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
regulatory protein Crp
qs_4_scaffold_1158_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5144..5602)
DNA (459bp) protein (153aa)
Regulatory protein Crp n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEN7_9EURY
Regulatory protein Crp {ECO:0000313|EMBL:ELZ33925.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JC
regulatory protein Crp
qs_4_scaffold_1158_10
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6114..6647)
DNA (534bp) protein (178aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209, ECO:0000313|EMBL:EMA28239.1}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_0020
Inorganic pyrophosphatase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L713_9EURY
inorganic pyrophosphatase
qs_4_scaffold_1158_11

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6956..7315
DNA (360bp) protein (120aa)
Transcriptional regulator PadR family protein n=1 Tax=halophilic archaeon DL31 RepID=G2MJ97_9ARCH
PadR family transcriptional regulator
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:AEN04646.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_4_scaffold_1158_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7441..8130)
DNA (690bp) protein (230aa)
RnhA operon protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQP4_9EURY
RnhA operon protein {ECO:0000313|EMBL:EMA48022.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
hypothetical protein
qs_4_scaffold_1158_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8123..8773)
DNA (651bp) protein (217aa)
Ribonuclease H n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N962_9EURY
Ribonuclease H {ECO:0000313|EMBL:EMA53639.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ribonuclease H
qs_4_scaffold_1158_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8946..9923
DNA (978bp) protein (326aa)
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7V0_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
transcription initiation factor TFB
qs_4_scaffold_1158_15
unknown

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10018..10230
DNA (213bp) protein (71aa)

This feature has no annotations

qs_4_scaffold_1158_16
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10340..10699)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0GYE7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ76497.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
hypothetical protein
qs_4_scaffold_1158_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10811..11953)
DNA (1143bp) protein (381aa)
Acyl-CoA dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ88_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA38882.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
acyl-CoA dehydrogenase
qs_4_scaffold_1158_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12294..12623)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFE4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44068.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
creatininase
Displaying 18 items

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