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qs_4_scaffold_1338

Search features with annotation key words

Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1338_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(537..1988)
DNA (1452bp) protein (484aa)
V-type ATP synthase beta chain n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NLU6_HALBP
ATP synthase, b subunit
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
qs_4_scaffold_1338_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2009..3772)
DNA (1764bp) protein (588aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1227456 species="Archaea;
V-type ATP synthase alpha chain n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCE1_9EURY
ATP synthase, A subunit
qs_4_scaffold_1338_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3969..4289)
DNA (321bp) protein (107aa)
V-type ATP synthase subunit F (EC:3.6.3.14)
V-type ATP synthase subunit F n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNY5_9EURY
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qs_4_scaffold_1338_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4405..5466)
DNA (1062bp) protein (354aa)
ntpC; V-type ATP synthase subunit C (EC:3.6.3.14)
V-type ATP synthase subunit C n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEX0_9EURY
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
qs_4_scaffold_1338_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5463..6236)
DNA (774bp) protein (258aa)
V-type ATP synthase subunit E (EC:3.6.3.14)
V-type proton ATPase subunit E n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5W7_HALJB
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
qs_4_scaffold_1338_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6260..6511)
DNA (252bp) protein (84aa)
atpC1; H+ ATP synthase sununit C (EC:3.6.3.14)
H+ ATP synthase sununit C n=6 Tax=Haloarcula RepID=Q5UXZ2_HALMA
H+ ATP synthase sununit C {ECO:0000313|EMBL:EMA28903.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6
qs_4_scaffold_1338_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6784..9189)
DNA (2406bp) protein (802aa)
V-type ATPase 116 kDa subunit n=1 Tax=Halococcus hamelinensis RepID=UPI00029B36F1
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismor
ATP synthase subunit I
qs_4_scaffold_1338_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9176..9517)
DNA (342bp) protein (114aa)
ATP synthase H subunit n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MSX4_HALMO
ATP synthase H subunit {ECO:0000313|EMBL:EMA48721.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.
ATP synthase H subunit
qs_4_scaffold_1338_9
unknown

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comp(9995..10171)
DNA (177bp) protein (59aa)

This feature has no annotations

qs_4_scaffold_1338_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11019..11672
DNA (654bp) protein (218aa)
Methyltransferase type 11 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5W3_HALJB
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADJ13769.1}; Type 11 methyltransferase {ECO:0000313|EMBL:ELY34185.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
qs_4_scaffold_1338_11
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11805..13319)
DNA (1515bp) protein (505aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTK7_HALBP
amino acid/amide ABC transporter membrane protein 2, haat family
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ADQ67059.1}; Amino acid/amide ABC transporter membrane protein 2, haat family {ECO:0000313|EMBL:ELY29606.1}; TaxID=46
qs_4_scaffold_1338_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13258..14280)
DNA (1023bp) protein (341aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTK6_HALBP
amino acid/amide ABC transporter membrane protein 1, haat family
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ADQ67058.1}; Amino acid/amide ABC transporter membrane protein 1, haat family {ECO:0000313|EMBL:ELY29605.1}; TaxID=46
qs_4_scaffold_1338_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14277..14423)
DNA (147bp) protein (49aa)
ABC transporter related protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPS6_9EURY
ABC transporter related protein {ECO:0000313|EMBL:EFW93529.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
ABC transporter
qs_4_scaffold_1338_14
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14774..15571)
DNA (798bp) protein (266aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0BAF5_9EURY
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ELZ07278.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegy
glycerophosphoryl diester phosphodiesterase
qs_4_scaffold_1338_15
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15693..16292
DNA (600bp) protein (200aa)
ADP-ribose pyrophosphatase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YEI5_9EURY
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:GAD52221.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
NUDIX hydrolase
qs_4_scaffold_1338_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16466..17956
DNA (1491bp) protein (497aa)
tRNA-guanine(15) transglycosylase {ECO:0000256|HAMAP-Rule:MF_01634}; EC=2.4.2.48 {ECO:0000256|HAMAP-Rule:MF_01634};; 7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01634}; A
tRNA-guanine transglycosylase (EC:2.4.2.29)
tRNA-guanine(15) transglycosylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMU9_9EURY
qs_4_scaffold_1338_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18032..18340
DNA (309bp) protein (103aa)
30S ribosomal protein S24e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTV3_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
30S ribosomal protein S24e
qs_4_scaffold_1338_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


18441..20363
DNA (1923bp) protein (641aa)
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH05_9EURY
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000256|HAMAP-Rule:MF_01447}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
O-sialolycoprotein endopeptidase/protein kinase
qs_4_scaffold_1338_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20507..21553
DNA (1047bp) protein (349aa)
Trk active potasium channel n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3W0_9EURY
Trk active potasium channel {ECO:0000313|EMBL:EMA52233.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
trk; trk active potasium channel
Displaying 19 items

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