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qs_4_scaffold_1520

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1520_1
unknown

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1..102
DNA (102bp) protein (34aa)

This feature has no annotations

qs_4_scaffold_1520_2
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(179..730)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CFI5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22001.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qs_4_scaffold_1520_3
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(850..1971)
DNA (1122bp) protein (374aa)
Sulfate transporter n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5J0_HALJB
sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:ELY36544.1}; Sulphate transporter {ECO:0000313|EMBL:ADJ15686.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
qs_4_scaffold_1520_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2059..3183)
DNA (1125bp) protein (375aa)
polyamine-transporting ATPase (EC:3.6.3.31)
Spermidine/putrescine ABC transporter ATPase component n=1 Tax=Halogranum salarium B-1 RepID=J3EUW1_9EURY
Spermidine/putrescine ABC transporter ATPase component {ECO:0000313|EMBL:EJN58247.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum s
qs_4_scaffold_1520_5
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3180..4190)
DNA (1011bp) protein (337aa)
ABC transporter; K15496 molybdate/tungstate transport system permease protein id=24636530 bin=Halorubrum_J07HR59 species=Halorubrum sp. J07HR59 genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halorubrum_J07HR59
ABC-type sulfate transport system, permease component {ECO:0000313|EMBL:ERH04008.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="H
ABC transporter
qs_4_scaffold_1520_6

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comp(4245..4469)
DNA (225bp) protein (75aa)
Tungstate/molybdate binding protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XC98_9ARCH
Tungstate/molybdate binding protein {ECO:0000313|EMBL:ESS05554.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
family 1 extracellular solute-binding protein
qs_4_scaffold_1520_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4682..5749
DNA (1068bp) protein (356aa)
Molybdate transport protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KDE2_9EURY
Molybdate transport protein {ECO:0000313|EMBL:EMA19372.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica
molybdenum transporter
qs_4_scaffold_1520_8
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5808..6497
DNA (690bp) protein (230aa)
Molybdenum ABC transporter permease protein n=2 Tax=Haloarcula hispanica RepID=G0HTS6_HALHT
molybdenum ABC transporter permease
Molybdenum ABC transporter permease {ECO:0000313|EMBL:AJF26116.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp.
qs_4_scaffold_1520_9
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6494..7261
DNA (768bp) protein (256aa)
ABC transporter related protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RUK2_HALTV
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB61174.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenic
qs_4_scaffold_1520_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7699..8388
DNA (690bp) protein (230aa)
Transcriptional regulator, ModE family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NET0_9EURY
Transcriptional regulator, ModE family protein {ECO:0000313|EMBL:EMA55200.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
transcriptional regulator, ModE family
qs_4_scaffold_1520_11
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8808..9473)
DNA (666bp) protein (222aa)
TRK potassium uptake system protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JMS7_HALVA
TRK potassium uptake system protein {ECO:0000313|EMBL:EMA09279.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula valli
trkA6; TRK potassium uptake system protein
qs_4_scaffold_1520_12
unknown

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10206..10352
DNA (147bp) protein (49aa)

This feature has no annotations

qs_4_scaffold_1520_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10414..10851)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MU33_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA48279.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
conserved hypothetical PilT domain protein
qs_4_scaffold_1520_14
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10844..11146)
DNA (303bp) protein (101aa)
Transcription regulator n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MV04_HALMO
Transcription regulator {ECO:0000313|EMBL:EMA48280.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
AbrB family transcriptional regulator
qs_4_scaffold_1520_15
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11235..12491)
DNA (1257bp) protein (419aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococc
thrC_1; threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MF50_HALMO
qs_4_scaffold_1520_16
unknown

Not on your lists

12696..12959
DNA (264bp) protein (88aa)

This feature has no annotations

qs_4_scaffold_1520_17
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13061..13444)
DNA (384bp) protein (128aa)
Putative DNA binding protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MG75_HALMO
Putative DNA binding protein {ECO:0000313|EMBL:EMA44353.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM
TrmB family transcription regulator
qs_4_scaffold_1520_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13654..14292
DNA (639bp) protein (213aa)
DSBA oxidoreductase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVM1_9EURY
DSBA oxidoreductase {ECO:0000313|EMBL:EMA49646.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
DSBA oxidoreductase
qs_4_scaffold_1520_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14665..15789
DNA (1125bp) protein (375aa)
AIR synthase related protein domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDC5_9EURY
AIR synthase related protein domain protein {ECO:0000313|EMBL:EMA43348.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
AIR synthase related protein domain protein
qs_4_scaffold_1520_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15786..17210
DNA (1425bp) protein (475aa)
Phosphomethylpyrimidine kinase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX29_9EURY
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EMA49878.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
phosphomethylpyrimidine kinase
qs_4_scaffold_1520_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17303..18055)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXS1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49644.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_4_scaffold_1520_22
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18529..18849)
DNA (321bp) protein (107aa)
Ferredoxin n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X790_9EURY
Ferredoxin {ECO:0000313|EMBL:ELY57467.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicus JCM 122
ferredoxin
qs_4_scaffold_1520_23
unknown

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comp(19181..19696)
DNA (516bp) protein (172aa)

This feature has no annotations

qs_4_scaffold_1520_24
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20266..21708
DNA (1443bp) protein (481aa)
DNA mismatch repair protein MutS n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EY47_9EURY
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000313|EMBL:ELZ51807.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.
DNA mismatch repair protein MutS
qs_4_scaffold_1520_25
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21705..24257
DNA (2553bp) protein (851aa)
DNA mismatch repair protein MutL n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LPE8_9EURY
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitrati
DNA mismatch repair protein MutL
qs_4_scaffold_1520_26
unknown

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comp(24626..24739)
DNA (114bp) protein (38aa)

This feature has no annotations

qs_4_scaffold_1520_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24780..24890)
DNA (111bp) protein (37aa)
Transposase {ECO:0000313|EMBL:EMA55412.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
Displaying 27 items

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