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qs_4_scaffold_1798

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1798_1
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(352..555)
DNA (204bp) protein (68aa)
CopA N-terminal domain-containing protein n=3 Tax=Halorubrum RepID=M0DJE8_9EURY
CopA N-terminal domain-containing protein {ECO:0000313|EMBL:ELZ34299.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum te
copper chaperone
qs_4_scaffold_1798_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(657..1202)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CES9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21148.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
transcriptional regulator, ArsR family
qs_4_scaffold_1798_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1332..1988
DNA (657bp) protein (219aa)
heavy metal translocating P-type ATPase (EC:3.6.3.4)
Heavy metal translocating P-type ATPase (Fragment) n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJY5_9EURY
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EMA45992.1}; Flags: Fragment;; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" s
qs_4_scaffold_1798_4
unknown

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comp(2527..2946)
DNA (420bp) protein (140aa)

This feature has no annotations

qs_4_scaffold_1798_5
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3142..3771
DNA (630bp) protein (210aa)
Heavy metal translocating P-type ATPase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWE6_HALLT
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ACM58536.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacus
qs_4_scaffold_1798_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4247..5215)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEQ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55180.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_1798_7
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5415..5654)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RSX5_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB60855.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
qs_4_scaffold_1798_8
unknown

Not on your lists

comp(5743..6042)
DNA (300bp) protein (100aa)

This feature has no annotations

qs_4_scaffold_1798_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6213..7145)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA35830.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_4_scaffold_1798_10
unknown

Not on your lists

7369..7611
DNA (243bp) protein (81aa)

This feature has no annotations

qs_4_scaffold_1798_11
unknown

Not on your lists

7831..8487
DNA (657bp) protein (219aa)

This feature has no annotations

qs_4_scaffold_1798_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8595..9869
DNA (1275bp) protein (425aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD90_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227455 species="Arc
tif2g; translation initiation factor IF-2 subunit gamma
qs_4_scaffold_1798_13
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9940..10455
DNA (516bp) protein (172aa)
Nucleotide binding protein PINc n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LV93_9EURY
Nucleotide binding protein PINc {ECO:0000313|EMBL:EMA37068.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5
PilT domain protein
qs_4_scaffold_1798_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10458..11042
DNA (585bp) protein (195aa)
rpoE1; DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E' n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNF1_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:EFW93946.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
qs_4_scaffold_1798_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11045..11242
DNA (198bp) protein (66aa)
Transcription elongation factor Spt4 n=2 Tax=Halococcus RepID=M0N3U6_HALMO
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
DNA-directed RNA polymerase subunit E, RpoE2
qs_4_scaffold_1798_16
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11247..11939
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQ24_9EURY
conserved hypothetical protein (DUF359)
UPF0218 protein HLRTI_000604 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiama
Displaying 16 items

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