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qs_4_scaffold_481

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_481_1
unknown

Not on your lists

10..315
DNA (306bp) protein (102aa)

This feature has no annotations

qs_4_scaffold_481_2
unknown

Not on your lists

302..430
DNA (129bp) protein (43aa)

This feature has no annotations

qs_4_scaffold_481_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(572..2116)
DNA (1545bp) protein (515aa)
Replication factor A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEM9_9EURY
Replication factor A {ECO:0000313|EMBL:EMA44181.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
single-stranded DNA-binding protein
qs_4_scaffold_481_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2349..3056)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIB2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44180.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_4_scaffold_481_trna_1
unknown

Not on your lists

3273..3345
DNA (73bp)
transferRNA
qs_4_scaffold_481_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3496..3837
DNA (342bp) protein (114aa)
Site-specific recombinase xerd n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W1Q3_9EURY
site-specific recombinase xerd
Site-specific recombinase xerd {ECO:0000313|EMBL:AGN02566.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harch
qs_4_scaffold_481_6
unknown

Not on your lists

comp(4023..4295)
DNA (273bp) protein (91aa)

This feature has no annotations

qs_4_scaffold_481_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4508..5449)
DNA (942bp) protein (314aa)
Alpha beta-propellor repeat-containing integrin n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2S9_9EURY
Alpha beta-propellor repeat-containing integrin {ECO:0000313|EMBL:EMA51833.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
hypothetical protein
qs_4_scaffold_481_8
unknown

Not on your lists

comp(5592..5894)
DNA (303bp) protein (101aa)

This feature has no annotations

qs_4_scaffold_481_9
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6265..7071)
DNA (807bp) protein (269aa)
Prephenate dehydratase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XVR3_9EURY
Prephenate dehydratase {ECO:0000313|EMBL:ELY65929.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
prephenate dehydratase
qs_4_scaffold_481_10
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7260..7628)
DNA (369bp) protein (123aa)
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JNF4_NATP1
acyl-CoA thioester hydrolase, YbgC/YbaW family
Acyl-CoA thioester hydrolase, YbgC/YbaW family {ECO:0000313|EMBL:AGB32779.1}; Thioesterase superfamily protein {ECO:0000313|EMBL:ELY75783.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria
qs_4_scaffold_481_11
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8353..8811)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DC03_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH35980.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
qs_4_scaffold_481_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9105..10529)
DNA (1425bp) protein (475aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
Dihydrolipoyl dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCS5_9EURY
dihydrolipoamide dehydrogenase
qs_4_scaffold_481_13
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10893..11573)
DNA (681bp) protein (227aa)
short-chain family oxidoreductase (EC:1.1.1.-)
Short chain dehydrogenase n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IDN4_9EURY
Short chain dehydrogenase {ECO:0000313|EMBL:ELZ93968.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512
qs_4_scaffold_481_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12009..13700)
DNA (1692bp) protein (564aa)
dsa; dihydrolipoamide S-acyltransferase (EC:2.3.1.-)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEQ6_9EURY
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EMA43149.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
qs_4_scaffold_481_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13700..14770)
DNA (1071bp) protein (357aa)
Pyruvate dehydrogenase (EC:1.2.4.1)
Transketolase central region n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFF1_9EURY
Transketolase central region {ECO:0000313|EMBL:EMA43150.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
qs_4_scaffold_481_16
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14775..15884)
DNA (1110bp) protein (370aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit {ECO:0000313|EMBL:AEH35755.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AEH35755.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobac
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6T8_HALXS
qs_4_scaffold_481_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16102..17202)
DNA (1101bp) protein (367aa)
Glycoside hydrolase family protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HGA8_9EURY
Glycoside hydrolase family protein {ECO:0000313|EMBL:ESP89755.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candid
glycoside hydrolase family protein
qs_4_scaffold_481_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17777..18091
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWW8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36585.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_4_scaffold_481_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18139..18462
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LW64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36584.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
qs_4_scaffold_481_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18761..20182)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDC0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55074.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_481_21
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20565..21500)
DNA (936bp) protein (312aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
Probable lipoyl synthase n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTG3_HALBP
lipoate synthase
qs_4_scaffold_481_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21896..22348
DNA (453bp) protein (151aa)
Heat shock protein Hsp20 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMP8_9EURY
Heat shock protein Hsp20 {ECO:0000313|EMBL:EMA46946.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
molecular chaperone
qs_4_scaffold_481_23
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22458..22910
DNA (453bp) protein (151aa)
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZZ38_9EURY
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ELY91341.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrial
peroxiredoxin
qs_4_scaffold_481_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22996..23466)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M370_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40141.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_4_scaffold_481_25
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24078..25247)
DNA (1170bp) protein (390aa)
Aryl-alcohol dehydrogenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CVV3_9EURY
Aryl-alcohol dehydrogenase {ECO:0000313|EMBL:ELZ27376.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidu
alcohol dehydrogenase
Displaying 26 items

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