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qs_4_scaffold_607

Search features with annotation key words

Displaying items 1-30 of 69 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_607_1
unknown

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3..137
DNA (135bp) protein (45aa)

This feature has no annotations

qs_4_scaffold_607_2
unknown

Not on your lists

comp(313..684)
DNA (372bp) protein (124aa)

This feature has no annotations

qs_4_scaffold_607_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(755..1486)
DNA (732bp) protein (244aa)
Beta-lactamase domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPG3_9EURY
Beta-lactamase domain protein {ECO:0000313|EMBL:EFW94124.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauciha
beta-lactamase
qs_4_scaffold_607_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1595..2413)
DNA (819bp) protein (273aa)
Aldo/keto reductase family oxidoreductase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N347_9EURY
Aldo/keto reductase family oxidoreductase {ECO:0000313|EMBL:EMA52377.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
yafB2; aldo/keto reductase family oxidoreductase
qs_4_scaffold_607_5
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2538..3005)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Anabaena sp. PCC 7108 RepID=UPI00034759EB
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AIJ20639.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
qs_4_scaffold_607_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(3018..3275)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Anabaena sp. PCC 7108 RepID=UPI00034759EB
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EFH90959.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonoba
hypothetical protein
qs_4_scaffold_607_7
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3637..4299
DNA (663bp) protein (221aa)
Uncharacterized protein {ECO:0000313|EMBL:ELY96171.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989
qs_4_scaffold_607_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4325..4642
DNA (318bp) protein (106aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPG1_9EURY
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EFW94122.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptat
Cupin 2 barrel domain-containing protein
qs_4_scaffold_607_9
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4878..5372
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RQ09_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB60268.1}; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigen
qs_4_scaffold_607_10
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5646..6866
DNA (1221bp) protein (407aa)
major facilitator superfamily transporter id=24621061 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Arabinose efflux permease {ECO:0000313|EMBL:ERH01476.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
major facilitator superfamily transporter
qs_4_scaffold_607_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6979..8070)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY06_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49305.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_4_scaffold_607_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8064..9278)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY06_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49305.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_607_13
unknown

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comp(9749..10462)
DNA (714bp) protein (238aa)

This feature has no annotations

qs_4_scaffold_607_14
unknown

Not on your lists

comp(10532..10825)
DNA (294bp) protein (98aa)

This feature has no annotations

qs_4_scaffold_607_15
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11137..12078
DNA (942bp) protein (314aa)
NMT1/THI5 like domain-containing protein; K15598 putative hydroxymethylpyrimidine transport system substrate-binding protein id=24619698 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:ERH07111.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
NMT1/THI5 like domain-containing protein
qs_4_scaffold_607_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12126..13226)
DNA (1101bp) protein (367aa)
AIR synthase related protein domain protein n=3 Tax=Halococcus hamelinensis RepID=M0M6X0_9EURY
AIR synthase related protein domain protein {ECO:0000313|EMBL:EMA41542.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
hmf; hydrogenase expression/formation protein
qs_4_scaffold_607_17
unknown

Not on your lists

comp(13309..13440)
DNA (132bp) protein (44aa)

This feature has no annotations

qs_4_scaffold_607_trna_1
unknown

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14144..14229
DNA (86bp)
transferRNA
qs_4_scaffold_607_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


14321..14848
DNA (528bp) protein (176aa)
30S ribosomal protein S13 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3Q7_9EURY
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
30S ribosomal protein S13
qs_4_scaffold_607_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


14848..15375
DNA (528bp) protein (176aa)
30S ribosomal protein S4 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS4_NATPD
rps4p; 30S ribosomal protein S4P
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qs_4_scaffold_607_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


15434..15838
DNA (405bp) protein (135aa)
30S ribosomal protein S11 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH1_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
30S ribosomal protein S14e (S11p)
qs_4_scaffold_607_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15846..16640
DNA (795bp) protein (265aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit D n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ17_9EURY
DNA-directed RNA polymerase, alpha subunit/40 kD subunit
qs_4_scaffold_607_trna_2
unknown

Not on your lists

16785..16869
DNA (85bp)
transferRNA
qs_4_scaffold_607_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


16996..17346
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWX4_9EURY
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
rpl18A; 50S ribosomal protein L18e
qs_4_scaffold_607_23
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17343..17786
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L322_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;
ribosomal protein L13, archaeal/eukaryotic
qs_4_scaffold_607_24
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17780..18175
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J323_HALJB
rps9p; 30S ribosomal protein S9P
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccu
qs_4_scaffold_607_25
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


18225..18419
DNA (195bp) protein (65aa)
DNA-directed RNA polymerase subunit N; K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] id=24614040 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit N
qs_4_scaffold_607_26
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18496..18705
DNA (210bp) protein (70aa)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192, ECO:0000313|EMBL:EJN59081.1}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1210908 species="Archaea; Euryarchaeota; Halo
DNA-directed RNA polymerase subunit K n=1 Tax=Halogranum salarium B-1 RepID=J3JFB5_9EURY
RNA polymerase Rpb6
qs_4_scaffold_607_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18706..19950
DNA (1245bp) protein (415aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4U4_9EURY
qs_4_scaffold_607_28
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


19987..20325
DNA (339bp) protein (113aa)
30S ribosomal protein S2 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6C5_HALXS
Suspect SCG annotation. See neighboring gene [qs_4_scaffold_607_29].
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source=
Displaying items 1-30 of 69 in total

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