ggKbase home page

qs_4_scaffold_685

Search features with annotation key words

Displaying items 1-30 of 52 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_685_1
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..335
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W5I4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN01737.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qs_4_scaffold_685_2
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(458..790)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LM68_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA34596.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qs_4_scaffold_685_3
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

933..1724
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IJ85_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ95928.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
qs_4_scaffold_685_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1939..2310
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NF11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56436.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_4_scaffold_685_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2324..2734
DNA (411bp) protein (137aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQM9_9EURY
hypothetical protein
qs_4_scaffold_685_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2830..4887)
DNA (2058bp) protein (686aa)
UvrABC system protein B n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBH3_9EURY
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
qs_4_scaffold_685_7
unknown

Not on your lists

comp(4961..5131)
DNA (171bp) protein (57aa)

This feature has no annotations

qs_4_scaffold_685_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5223..5849)
DNA (627bp) protein (209aa)
Major facilitator superfamily transporter n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU42_NATPD
tp14; major facilitator family hexuronate transporter
Major facilitator superfamily transport protein {ECO:0000313|EMBL:CAI48341.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
qs_4_scaffold_685_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6395..7351)
DNA (957bp) protein (319aa)
Putative HTH-type transcriptional regulatory protein C450_04057 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCA8_9EURY
Putative HTH-type transcriptional regulatory protein C450_04057 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
XRE family transcriptional regulator
qs_4_scaffold_685_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7647..9992)
DNA (2346bp) protein (782aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAY7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41540.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_4_scaffold_685_11
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10318..10509
DNA (192bp) protein (64aa)
hypothetical protein id=24628527 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Uncharacterized protein {ECO:0000313|EMBL:ERG91275.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
qs_4_scaffold_685_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10768..12150)
DNA (1383bp) protein (461aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NM22_HALBP
qs_4_scaffold_685_13
unknown

Not on your lists

12405..12680
DNA (276bp) protein (92aa)

This feature has no annotations

qs_4_scaffold_685_14
unknown

Not on your lists

comp(12662..12874)
DNA (213bp) protein (71aa)

This feature has no annotations

qs_4_scaffold_685_15
unknown

Not on your lists

13072..13914
DNA (843bp) protein (281aa)

This feature has no annotations

qs_4_scaffold_685_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13991..14851
DNA (861bp) protein (287aa)
Alpha amylase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M491_HALMO
Alpha amylase {ECO:0000313|EMBL:EMA39444.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
hypothetical protein
qs_4_scaffold_685_17
unknown

Not on your lists

15486..15614
DNA (129bp) protein (43aa)

This feature has no annotations

qs_4_scaffold_685_18
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15756..16790)
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=4 Tax=Halobacterium salinarum RepID=RADA_HALS3
radA; DNA repair and recombination protein RadA
DNA repair and recombination protein RadA {ECO:0000255|HAMAP-Rule:MF_00348}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Hal
qs_4_scaffold_685_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17361..17966)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDP8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42809.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_4_scaffold_685_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18445..19323)
DNA (879bp) protein (293aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
htpX1; heat shock protein HtpX (EC:3.4.24.-)
Protease HtpX homolog n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEG7_9EURY
qs_4_scaffold_685_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19433..20329
DNA (897bp) protein (299aa)
UDP-glucose 4-epimerase n=1 Tax=Halogranum salarium B-1 RepID=J3A391_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EJN59833.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
galE6; UDP-glucose 4-epimerase
qs_4_scaffold_685_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20453..21667
DNA (1215bp) protein (405aa)
NMD3 family protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5H4_9EURY
NMD3 family protein {ECO:0000313|EMBL:EMA40653.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
NMD3 family protein
qs_4_scaffold_685_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21979..22431
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N641_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53402.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_685_24
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22583..22804)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QMX6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93771.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_4_scaffold_685_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22912..23985
DNA (1074bp) protein (358aa)
NmrA family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCL4_9EURY
NmrA family protein {ECO:0000313|EMBL:EMA55313.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
nolA_2; NADH dehydrogenase 32K chain-like protein
qs_4_scaffold_685_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23982..24782
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBG3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55312.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_685_27
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24899..25069)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IH64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ95193.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
qs_4_scaffold_685_28
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25182..26081
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X4X5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY56672.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
qs_4_scaffold_685_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26247..28421
DNA (2175bp) protein (725aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N0L9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50639.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_685_30
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28425..28556)
DNA (132bp) protein (44aa)
Uncharacterized protein {ECO:0000313|EMBL:AHB65730.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
Displaying items 1-30 of 52 in total

View Taxonomy