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qs_4_scaffold_696

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_696_1
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..1823
DNA (1821bp) protein (607aa)
metallophosphoesterase id=24653746 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
DNA repair exonuclease {ECO:0000313|EMBL:ERG88134.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
metallophosphoesterase
qs_4_scaffold_696_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1827..4511
DNA (2685bp) protein (895aa)
DNA double-strand break repair Rad50 ATPase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6D7I8_9EURY
DNA double-strand break repair Rad50 ATPase
DNA double-strand break repair Rad50 ATPase {ECO:0000256|HAMAP-Rule:MF_00449}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Ha
qs_4_scaffold_696_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4566..5132)
DNA (567bp) protein (189aa)
dut; dUTP diphosphatase (EC:3.6.1.23)
DUTP diphosphatase {ECO:0000313|EMBL:CCQ35742.1}; EC=3.6.1.23 {ECO:0000313|EMBL:CCQ35742.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomona
DUTP diphosphatase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP45_NATM8
qs_4_scaffold_696_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5767..7734
DNA (1968bp) protein (656aa)
Aconitate hydratase {ECO:0000313|EMBL:EMA44058.1}; EC=4.2.1.3 {ECO:0000313|EMBL:EMA44058.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFD8_9EURY
qs_4_scaffold_696_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8488..9657
DNA (1170bp) protein (390aa)
acaB_8; acetyl-CoA C-acyltransferase 8 (EC:2.3.1.16)
Acetyl-CoA C-acyltransferase 8 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1S1_9EURY
Acetyl-CoA C-acyltransferase 8 {ECO:0000313|EMBL:EMA50640.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
qs_4_scaffold_696_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9654..10073
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNH9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46299.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_4_scaffold_696_7
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(10084..10617)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZZP2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY91985.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
qs_4_scaffold_696_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11216..11644
DNA (429bp) protein (143aa)
RNA-binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBT0_9EURY
RNA-binding protein {ECO:0000313|EMBL:EMA54130.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
putative RNA-binding protein, contains TRAM domain
qs_4_scaffold_696_9
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11729..11893)
DNA (165bp) protein (55aa)
Phenazine biosynthesis protein PhzF family n=2 Tax=Haladaptatus paucihalophilus RepID=E7QQT2_9EURY
Phenazine biosynthesis protein {ECO:0000313|EMBL:KDE56921.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56
phzF; putative phenazine biosynthesis protein
qs_4_scaffold_696_10
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11896..12672)
DNA (777bp) protein (259aa)
Phenazine biosynthesis protein PhzF family n=2 Tax=Haladaptatus paucihalophilus RepID=E7QQT2_9EURY
Phenazine biosynthesis protein {ECO:0000313|EMBL:KDE56921.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56
phenazine biosynthesis protein PhzF family
qs_4_scaffold_696_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13033..14253
DNA (1221bp) protein (407aa)
Muconate lactonizing mandelate racemase protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB35_9EURY
Muconate lactonizing mandelate racemase protein {ECO:0000313|EMBL:EMA54314.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
muconate lactonizing mandelate racemase protein
qs_4_scaffold_696_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15098..16519
DNA (1422bp) protein (474aa)
Major facilitator superfamily MFS_1 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QMX4_9EURY
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFW93769.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus p
macrolide-efflux protein / Permease
qs_4_scaffold_696_13

Not on your lists

17221..18372
DNA (1152bp) protein (384aa)
Malate/L-lactate dehydrogenase n=1 Tax=uncultured archaeon A07HR60 RepID=V4YLY5_9ARCH
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:ESS12602.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
malate/lactate dehydrogenase
qs_4_scaffold_696_14
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(18507..18977)
DNA (471bp) protein (157aa)
UspA domain-containing protein n=1 Tax=halophilic archaeon DL31 RepID=G2MG46_9ARCH
UspA domain-containing protein
Universal stress protein UspA related nucleotide-binding protein {ECO:0000313|EMBL:ERG90213.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratu
qs_4_scaffold_696_15
unknown

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comp(19004..19120)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 15 items

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