ggKbase home page

qs_4_scaffold_823

Search features with annotation key words

Displaying items 1-30 of 33 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_823_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..253)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M265_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39917.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_4_scaffold_823_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

727..2712
DNA (1986bp) protein (662aa)
Glycoside hydrolase 15-like protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBD2_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:EMA53970.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
glycosyl hydrolase, glucoamylase
qs_4_scaffold_823_3
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2950..4887
DNA (1938bp) protein (646aa)
Glycoside hydrolase 15-like protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VTJ4_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:ELY40312.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibe
glycoside hydrolase 15-like protein
qs_4_scaffold_823_4
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4934..6238)
DNA (1305bp) protein (435aa)
Arabinose efflux permease family protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HVB5_9EURY
Arabinose efflux permease family protein {ECO:0000313|EMBL:ELZ87703.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elong
MFS transporter
qs_4_scaffold_823_5
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7129..8181
DNA (1053bp) protein (351aa)
arginosuccinate synthase n=1 Tax=Halorubrum sp. T3 RepID=UPI00036F40DB
PP-loop domain protein {ECO:0000313|EMBL:EMA61625.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;"
PP-loop domain protein
qs_4_scaffold_823_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8379..9569)
DNA (1191bp) protein (397aa)
Cell division protein FtsZ n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JUW1_HALVA
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
cell division protein FtsZ
qs_4_scaffold_823_7
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9571..9777)
DNA (207bp) protein (69aa)
transcriptional regulator, CopG family id=24654776 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Transcriptional regulator, CopG family protein {ECO:0000313|EMBL:ERG89722.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
transcriptional regulator, CopG family
qs_4_scaffold_823_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10005..10553)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWG3_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46304.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_823_trna_1
unknown

Not on your lists

10833..10906
DNA (74bp)
transferRNA
qs_4_scaffold_823_9
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10844..11782)
DNA (939bp) protein (313aa)
Alpha/beta hydrolase fold protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C5F3_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ELZ18445.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina
putative hydrolase or acyltransferase of alpha/beta superfamily
qs_4_scaffold_823_10
unknown

Not on your lists

comp(11961..12338)
DNA (378bp) protein (126aa)

This feature has no annotations

qs_4_scaffold_823_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12438..13643
DNA (1206bp) protein (402aa)
xaa-pro aminopeptidase id=24615945 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Xaa-pro aminopeptidase {ECO:0000313|EMBL:ESP88149.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobon
Xaa-Pro aminopeptidase
qs_4_scaffold_823_12
unknown

Not on your lists

13885..14619
DNA (735bp) protein (245aa)

This feature has no annotations

qs_4_scaffold_823_13
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14948..15877)
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Archaea RepID=U1Q5R3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH00317.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
qs_4_scaffold_823_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15877..16110)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTD3_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37714.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_4_scaffold_823_15
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16771..18825
DNA (2055bp) protein (685aa)
Aldo/keto reductase n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DHY8_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ34342.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;"
aldo/keto reductase
qs_4_scaffold_823_16
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18871..19494)
DNA (624bp) protein (208aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQL3_HALUD
tRNA 2'-O-methylase
qs_4_scaffold_823_17
unknown

Not on your lists

comp(20220..20432)
DNA (213bp) protein (71aa)

This feature has no annotations

qs_4_scaffold_823_18
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20743..21678
DNA (936bp) protein (312aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CCQ32382.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CCQ32382.1};; UDP-glucose 4-epimerase protein {ECO:0000313|EMBL:ERJ06915.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ERJ06915.1
UDP-glucose 4-epimerase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PHS0_9EURY
qs_4_scaffold_823_19
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22129..22350
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1NRF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH06385.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
qs_4_scaffold_823_20
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22366..22827
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YT06_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05682.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
qs_4_scaffold_823_21
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23112..23861
DNA (750bp) protein (250aa)
DnaJ N-terminal domain-containing protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HJE2_9EURY
DnaJ N-terminal domain-containing protein {ECO:0000313|EMBL:ESP88039.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
ferredoxin
qs_4_scaffold_823_22
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23947..24363)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YJV1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY74409.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
qs_4_scaffold_823_23
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24538..25257
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IGR7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03401.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qs_4_scaffold_823_24
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25413..25688)
DNA (276bp) protein (92aa)
Transcriptional regulator, arsr family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MYD1_9EURY
Transcriptional regulator, arsr family protein {ECO:0000313|EMBL:EMA50328.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
ArsR family transcriptional regulator
qs_4_scaffold_823_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25879..26337
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRR3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36166.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_4_scaffold_823_26
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26451..26759
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5H8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51940.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
qs_4_scaffold_823_27
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26869..27279
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5V1Q5_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46547.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qs_4_scaffold_823_28
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27311..27673)
DNA (363bp) protein (121aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEI8_9EURY
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EJN58399.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogran
dppDF2; putative dipeptides/oligopeptides ABC transporter ATP-binding protein
qs_4_scaffold_823_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27835..28485
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2X9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51030.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
Displaying items 1-30 of 33 in total

View Taxonomy