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qs_4_scaffold_1124

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1124_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..688
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L4B0_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28386.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_4_scaffold_1124_2
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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664..1263
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L4B0_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28386.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_4_scaffold_1124_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1883..2245)
DNA (363bp) protein (121aa)
IS240-type transposase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKD8_NATM8
IS240-type transposase
ISH14-type transposase ISNamo10 {ECO:0000313|EMBL:CCQ35713.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moola
qs_4_scaffold_1124_4
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2644..3102
DNA (459bp) protein (153aa)
Transposase ISH18 n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JX43_9EURY
Transposase ISH18 {ECO:0000313|EMBL:EMA12539.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.
tnp; putative transposase
qs_4_scaffold_1124_5
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3130..3474
DNA (345bp) protein (115aa)
Transposase ISH18 n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JX43_9EURY
Transposase ISH18 {ECO:0000313|EMBL:EMA12539.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.
transposase (ISH18)
qs_4_scaffold_1124_6
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3701..4033)
DNA (333bp) protein (111aa)
Site-specific recombinase xerd n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0ISF8_9EURY
Tyrosine recombinase XerC {ECO:0000313|EMBL:CQR49831.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
integrase family protein
qs_4_scaffold_1124_trna_1
unknown

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comp(4283..4366)
DNA (84bp)
transferRNA
qs_4_scaffold_1124_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4660..4971
DNA (312bp) protein (104aa)
cyclin n=1 Tax=Halomicrobium katesii RepID=UPI0003774D15
transcription factor TFIIB cyclin-related protein
Transcription factor TFIIB cyclin-related {ECO:0000313|EMBL:ACV48355.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomic
qs_4_scaffold_1124_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4972..5460)
DNA (489bp) protein (163aa)
Cytidyltransferase-related domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXC0_HALMD
cytidyltransferase
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:ACV48354.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomic
qs_4_scaffold_1124_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5570..6151)
DNA (582bp) protein (194aa)
Transcriptional regulator, TrmB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXB9_HALMD
TrmB family transcriptional regulator
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ACV48353.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
qs_4_scaffold_1124_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6458..7543)
DNA (1086bp) protein (362aa)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=485914 species="
Carboxylate-amine ligase Hmuk_2239 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXB8_HALMD
carboxylate-amine ligase rbh
qs_4_scaffold_1124_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(7569..8210)
DNA (642bp) protein (214aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobact
fibrillin n=1 Tax=Halomicrobium katesii RepID=UPI00036E1AC1
fibrillarin
qs_4_scaffold_1124_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8207..9046)
DNA (840bp) protein (280aa)
Pre-mRNA processing ribonucleoprotein, binding domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXB6_HALMD
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein rbh
Pre-mRNA processing ribonucleoprotein, binding domain protein {ECO:0000313|EMBL:ACV48350.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobiu
qs_4_scaffold_1124_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9132..11090
DNA (1959bp) protein (653aa)
AMP-dependent synthetase and ligase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXB5_HALMD
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACV48349.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
AMP-dependent synthetase and ligase
qs_4_scaffold_1124_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11207..12640)
DNA (1434bp) protein (478aa)
DASH family cryptochrome (EC:4.1.99.3) rbh
Cryptochrome, DASH family {ECO:0000313|EMBL:ACV48348.1}; EC=4.1.99.3 {ECO:0000313|EMBL:ACV48348.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
Cryptochrome DASH n=1 Tax=Halomicrobium katesii RepID=UPI0003703605
Displaying 15 items

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