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qs_4_scaffold_114

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_114_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..1653
DNA (1653bp) protein (551aa)
tRNA-ribosyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI000376D033
PUA domain containing protein rbh
PUA domain containing protein {ECO:0000313|EMBL:ACV47554.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
qs_4_scaffold_114_2
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1891..2361
DNA (471bp) protein (157aa)
Transposase (ISH18) n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XLG1_9EURY
Transposase (ISH18) {ECO:0000313|EMBL:ELY62619.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 18795.;
ISH18-type transposase
qs_4_scaffold_114_3
unknown

Not on your lists

comp(3459..3557)
DNA (99bp) protein (33aa)

This feature has no annotations

qs_4_scaffold_114_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3681..4466)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SRM0_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ24163.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
IclR family transcriptional regulator
qs_4_scaffold_114_5
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4852..5604
DNA (753bp) protein (251aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ELZ39297.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ELZ39297.1};; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DX41_9EURY
short-chain dehydrogenase/reductase SDR
qs_4_scaffold_114_6
unknown

Not on your lists

5831..5977
DNA (147bp) protein (49aa)

This feature has no annotations

qs_4_scaffold_114_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5977..6975
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JFJ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59271.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_4_scaffold_114_8
Vibrio ezurae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7025..7348
DNA (324bp) protein (108aa)
Putative D-galactarate dehydratase n=1 Tax=Vibrio ezurae NBRC 102218 RepID=U3B4T7_9VIBR
Putative D-galactarate dehydratase {ECO:0000313|EMBL:GAD80955.1}; TaxID=1219080 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio ezurae NBRC
garD; dehydratase
qs_4_scaffold_114_9
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7355..8521
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI0003683DA1
Uncharacterized protein {ECO:0000313|EMBL:KJS18889.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
carbohydrate hydrolase
qs_4_scaffold_114_10
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8650..9930
DNA (1281bp) protein (427aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
Histidinol dehydrogenase n=1 Tax=Natronococcus occultus SP4 RepID=L0K3I6_9EURY
histidinol dehydrogenase
qs_4_scaffold_114_11
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10467..11606
DNA (1140bp) protein (380aa)
C4-dicarboxylate ABC transporter n=1 Tax=gamma proteobacterium HIMB30 RepID=UPI000262CB5D
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:KGM89355.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteracea
hpsK; Dihydroxypropanesulfonate (DHPS) TRAP transporter
qs_4_scaffold_114_12
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11645..12211
DNA (567bp) protein (189aa)
Trap dicarboxylate transporter, dctq subunit n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NNL7_9RHOB
Trap dicarboxylate transporter, dctq subunit {ECO:0000313|EMBL:EEE37070.1}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacte
TRAP transporter permease
qs_4_scaffold_114_13
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12214..13488
DNA (1275bp) protein (425aa)
C4-dicarboxylate ABC transporter n=1 Tax=Leucothrix mucor RepID=UPI0003B75D52
Uncharacterized protein {ECO:0000313|EMBL:ESQ08901.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
putative TRAP-type C4-dicarboxylate transport system, large permease component DctM
qs_4_scaffold_114_14
unknown

Not on your lists

13575..13853
DNA (279bp) protein (93aa)

This feature has no annotations

qs_4_scaffold_114_15
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14528..14815)
DNA (288bp) protein (96aa)
Transposase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NMW2_9EURY
Transposase {ECO:0000313|EMBL:EMA59136.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;"
transposase
qs_4_scaffold_114_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15038..16333
DNA (1296bp) protein (432aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22) rbh
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ACV47551.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ACV47551.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Nucleotide sugar dehydrogenase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P379_HALMD
qs_4_scaffold_114_17
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16327..16719
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037BBB69
VanZ like family protein {ECO:0000313|EMBL:ELZ87624.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-151
VanZ like family protein
qs_4_scaffold_114_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16843..17919
DNA (1077bp) protein (359aa)
Radical SAM domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P377_HALMD
radical SAM protein rbh
Radical SAM domain protein {ECO:0000313|EMBL:ACV47549.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohata
qs_4_scaffold_114_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18358..19119
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P376_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47548.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_114_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19130..19807)
DNA (678bp) protein (226aa)
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3) rbh
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421};; Formyl
phosphoribosylformylglycinamidine synthase n=1 Tax=Halomicrobium katesii RepID=UPI0003656576
qs_4_scaffold_114_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19804..20061)
DNA (258bp) protein (86aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formyl
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEN5_9EURY
phosphoribosylformylglycinamidine synthase PurS
qs_4_scaffold_114_22
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20136..20816)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037DFA21
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47545.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_114_23
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20826..21719)
DNA (894bp) protein (298aa)
Small GAF containing sensor n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IVH0_HALVA
Small GAF containing sensor {ECO:0000313|EMBL:EMA17600.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae A
small GAF containing sensor
qs_4_scaffold_114_24
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21830..22843
DNA (1014bp) protein (338aa)
Formyl transferase domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P370_HALMD
formyl transferase
Formyl transferase domain protein {ECO:0000313|EMBL:ACV47542.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium m
qs_4_scaffold_114_25
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22966..23994)
DNA (1029bp) protein (343aa)
SAICAR synthetase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P369_HALMD
phosphoribosylaminoimidazole-succinocarboxamide synthase
SAICAR synthetase {ECO:0000313|EMBL:ACV47541.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strai
qs_4_scaffold_114_26
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24296..25651
DNA (1356bp) protein (452aa)
FO synthase n=1 Tax=Halomicrobium katesii RepID=UPI000380446F
FO synthase subunit 2 rbh
Radical SAM domain protein {ECO:0000313|EMBL:ACV47539.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohata
qs_4_scaffold_114_27
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25670..26992)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037704AA
cytochrome P450 rbh
Cytochrome P450 {ECO:0000313|EMBL:ACV47538.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain
qs_4_scaffold_114_28
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27079..27729
DNA (651bp) protein (217aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P365_HALMD
Bacterio-opsin activator HTH domain-containing protein rbh
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:ACV47537.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halom
qs_4_scaffold_114_29
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27748..28863)
DNA (1116bp) protein (372aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}
radical SAM protein n=1 Tax=Halomicrobium katesii RepID=UPI00037213D1
cofG; FO synthase subunit 1
qs_4_scaffold_114_30
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28897..29517)
DNA (621bp) protein (207aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000255|HAMAP-Rule:MF_02114};; TaxID=485914
2-phospho-L-lactate guanylyltransferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=COFC_HALMD
phospholactate guanylyltransferase
Displaying items 1-30 of 61 in total

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