ggKbase home page

qs_4_scaffold_134

Search features with annotation key words

Displaying items 1-30 of 79 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_134_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..783)
DNA (783bp) protein (261aa)
ABC-transport system ATP binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D096_9EURY
ABC-transport system ATP binding protein {ECO:0000313|EMBL:ELZ27544.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
hypothetical protein
qs_4_scaffold_134_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1017..2063)
DNA (1047bp) protein (349aa)
Sugar ABC transporter integral membrane subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWF3_9EURY
Sugar ABC transporter integral membrane subunit {ECO:0000313|EMBL:ELZ27546.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
hypothetical protein
qs_4_scaffold_134_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2309..3010
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JDC2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57364.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_4_scaffold_134_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3104..3886
DNA (783bp) protein (261aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Halogranum salarium B-1 RepID=J3ETC3_9EURY
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EJN57367.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.
short-chain dehydrogenase
qs_4_scaffold_134_5
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3900..4898)
DNA (999bp) protein (333aa)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X3L0_9EURY
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000313|EMBL:ELY56359.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronoco
4-hydroxythreonine-4-phosphate dehydrogenase
qs_4_scaffold_134_6
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4955..6187)
DNA (1233bp) protein (411aa)
DUF1537 family protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GUQ9_HALVD
ygbK domain-containing protein
DUF1537 family protein {ECO:0000313|EMBL:ADE03049.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 29
qs_4_scaffold_134_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6228..7403)
DNA (1176bp) protein (392aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZU5_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ELZ27942.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Ha
mandelate racemase/muconate lactonizing protein
qs_4_scaffold_134_8
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7479..8246)
DNA (768bp) protein (256aa)
Transcriptional regulator n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X471_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELY55393.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus D
transcriptional regulator
qs_4_scaffold_134_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9269..9439
DNA (171bp) protein (57aa)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3W5_HALMD
5-formyltetrahydrofolate cyclo-ligase
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:ACV47787.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobi
qs_4_scaffold_134_10
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9561..11051)
DNA (1491bp) protein (497aa)
Glycoside hydrolase family 5 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S260_HALTV
glycoside hydrolase family 5
Glycoside hydrolase family 5 {ECO:0000313|EMBL:ADB63457.1}; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloter
qs_4_scaffold_134_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11215..12621)
DNA (1407bp) protein (469aa)
Pyridine nucleotide-disulphide oxidoreductase dimerisation region n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3W1_HALMD
pyridine nucleotide-disulfide oxidoreductase dimerisation region rbh
Pyridine nucleotide-disulphide oxidoreductase dimerisation region {ECO:0000313|EMBL:ACV47783.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
qs_4_scaffold_134_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12678..15203)
DNA (2526bp) protein (842aa)
Patched family protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3W0_HALMD
Patched family protein {ECO:0000313|EMBL:ACV47782.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (
hypothetical protein rbh
qs_4_scaffold_134_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15205..17472)
DNA (2268bp) protein (756aa)
sialidase n=1 Tax=Halomicrobium katesii RepID=UPI00037BCD48
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47781.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
qs_4_scaffold_134_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17689..18318
DNA (630bp) protein (210aa)
Transcriptional regulator, TetR family n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3V8_HALMD
TetR family transcriptional regulator rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACV47780.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrob
qs_4_scaffold_134_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18460..19041)
DNA (582bp) protein (194aa)
Response regulator receiver protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3V6_HALMD
response regulator receiver protein rbh
Response regulator receiver protein {ECO:0000313|EMBL:ACV47778.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
qs_4_scaffold_134_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19146..19496
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003813F8D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47777.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_134_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19500..20363)
DNA (864bp) protein (288aa)
NAD(+) kinase (EC:2.7.1.23) rbh
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=485914 species="Archaea; Euryarchaeota;
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3V4_HALMD
qs_4_scaffold_134_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20501..21601
DNA (1101bp) protein (367aa)
circadian clock protein KaiC (EC:2.7.11.1) rbh
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:ACV47775.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ACV47775.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
Putative circadian clock protein, KaiC n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3V3_HALMD
qs_4_scaffold_134_19
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21697..22563)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1N3C0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG97379.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qs_4_scaffold_134_20
unknown

Not on your lists

comp(22624..23661)
DNA (1038bp) protein (346aa)

This feature has no annotations

qs_4_scaffold_134_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23933..24109
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036FCD0B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47641.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_134_22
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24131..24964)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3G8_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47640.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
qs_4_scaffold_134_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25056..25691
DNA (636bp) protein (212aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4) rbh
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114};; 2-deoxy-D-ribose 5-phosphate aldolase {E
deoxyribose-phosphate aldolase n=1 Tax=Halomicrobium katesii RepID=UPI00035E6769
qs_4_scaffold_134_24
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25684..25989
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000369E26C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47637.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_134_25
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26055..27311
DNA (1257bp) protein (419aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3G4_HALMD
MiaB-like tRNA modifying enzyme rbh
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ACV47636.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
qs_4_scaffold_134_26
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27344..28480)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000382BEDA
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV47634.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_134_27
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28470..29141)
DNA (672bp) protein (224aa)
ABC transporter related n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3G1_HALMD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACV47633.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_134_28
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29138..30952)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3G0_HALMD
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV47632.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
qs_4_scaffold_134_29
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31194..32105)
DNA (912bp) protein (304aa)
Cation diffusion facilitator family transporter n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3F6_HALMD
cation diffusion facilitator family transporter rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ACV47628.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomic
qs_4_scaffold_134_30
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32131..32697)
DNA (567bp) protein (189aa)
Histidine triad (HIT) protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3F4_HALMD
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ACV47626.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
Displaying items 1-30 of 79 in total

View Taxonomy