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qs_4_scaffold_478

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_478_1
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..585
DNA (585bp) protein (195aa)
Glycerophosphodiester phosphodiesterase n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GT79_HALVD
ugpQ; glycerophosphodiester phosphodiesterase
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:ADE03511.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcani
qs_4_scaffold_478_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(649..1602)
DNA (954bp) protein (318aa)
Transcription initiation factor IIB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZL7_HALMD
transcription factor TFIIB cyclin-related protein rbh
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qs_4_scaffold_478_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1870..2751
DNA (882bp) protein (294aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Halomicrobium katesii RepID=UPI0003630AA4
3-hydroxyacyl-CoA dehydrogenase rbh
3-hydroxyacyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACV48784.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Ha
qs_4_scaffold_478_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2868..3053
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZL4_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48782.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_478_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3056..3322
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZL3_HALMD
translation elongation factor aEF-1 beta
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=485914
qs_4_scaffold_478_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3496..3786
DNA (291bp) protein (97aa)
50S ribosomal protein L21e n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZL2_HALMD
50S ribosomal protein L21e
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobiu
qs_4_scaffold_478_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3790..4146
DNA (357bp) protein (119aa)
DNA-directed RNA polymerase subunit F n=1 Tax=Halomicrobium katesii RepID=UPI000379AE2E
RNA polymerase Rpb4
RNA polymerase Rpb4 {ECO:0000313|EMBL:ACV48779.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (str
qs_4_scaffold_478_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4207..4782
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZL0_HALMD
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV48778.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_478_9
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4802..5203)
DNA (402bp) protein (134aa)
IS1341-type transposase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X102_9EURY
transposase
IS1341-type transposase {ECO:0000313|EMBL:ELY55400.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
qs_4_scaffold_478_10
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5378..6109)
DNA (732bp) protein (244aa)
IS1341-type transposase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X102_9EURY
transposase
IS1341-type transposase {ECO:0000313|EMBL:ELY55400.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
qs_4_scaffold_478_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6264..7112
DNA (849bp) protein (283aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZK9_HALMD
ksgA; dimethyladenosine transferase rbh
qs_4_scaffold_478_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7114..7722
DNA (609bp) protein (203aa)
Methylase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZK8_HALMD
methylase
Methylase {ECO:0000313|EMBL:ACV48776.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain ATCC 7
qs_4_scaffold_478_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7785..8780
DNA (996bp) protein (332aa)
Cobalamin-independent synthase MetE domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZK6_HALMD
Cobalamin-independent synthase MetE domain-containing protein rbh
Cobalamin-independent synthase MetE domain protein {ECO:0000313|EMBL:ACV48774.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
qs_4_scaffold_478_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8777..9850
DNA (1074bp) protein (358aa)
methionine synthase n=1 Tax=Halomicrobium katesii RepID=UPI000363867B
methionine synthase rbh
Methionine synthase vitamin-B12 independent {ECO:0000313|EMBL:ACV48773.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halom
qs_4_scaffold_478_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10046..10561
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P074_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48866.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_478_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10631..11608
DNA (978bp) protein (326aa)
translation initiation factor IF-2 (EC:5.3.1.23) rbh
Translation initiation factor, aIF-2BII family {ECO:0000313|EMBL:ACV48867.1}; EC=5.3.1.23 {ECO:0000313|EMBL:ACV48867.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
Translation initiation factor, aIF-2BII family n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P075_HALMD
qs_4_scaffold_478_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11658..12530
DNA (873bp) protein (291aa)
PfkB domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P077_HALMD
PfkB domain-containing protein rbh
PfkB domain protein {ECO:0000313|EMBL:ACV48869.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (str
qs_4_scaffold_478_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12541..13623)
DNA (1083bp) protein (361aa)
phosphotransferase n=1 Tax=Halomicrobium katesii RepID=UPI000370FAA8
aminoglycoside phosphotransferase rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACV48870.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium m
qs_4_scaffold_478_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13607..14263)
DNA (657bp) protein (219aa)
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39)
Ribulose bisphosphate carboxylase {ECO:0000256|HAMAP-Rule:MF_01133}; Short=RuBisCO {ECO:0000256|HAMAP-Rule:MF_01133};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01133};; TaxID=485914 species="Archaea; Eu
Ribulose bisphosphate carboxylase, type III n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P079_HALMD
qs_4_scaffold_478_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14287..14802)
DNA (516bp) protein (172aa)
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39)
Ribulose bisphosphate carboxylase {ECO:0000256|HAMAP-Rule:MF_01133}; Short=RuBisCO {ECO:0000256|HAMAP-Rule:MF_01133};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01133};; TaxID=485914 species="Archaea; Eu
Ribulose bisphosphate carboxylase, type III n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P079_HALMD
qs_4_scaffold_478_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14972..15976
DNA (1005bp) protein (335aa)
5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000313|EMBL:ACV48873.1}; EC=1.5.99.11 {ECO:0000313|EMBL:ACV48873.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P081_HALMD
qs_4_scaffold_478_22
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16088..16786)
DNA (699bp) protein (233aa)
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_02131}; Short=HPPK {ECO:0000256|HAMAP-Rule:MF_02131};; EC=2.7.6.3 {ECO:0000256|HAMAP-Rule:MF_02131};; 2-amino-4-hydroxy-6
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003816DBC
hypothetical protein rbh
qs_4_scaffold_478_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16979..18154)
DNA (1176bp) protein (392aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase {ECO:0000313|EMBL:ACV48876.1}; EC=2.5.1.15 {ECO:0000313|EMBL:ACV48876.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halom
dihydropteroate synthase n=1 Tax=Halomicrobium katesii RepID=UPI00035E8189
qs_4_scaffold_478_24
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18285..18809
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036B6C88
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48878.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_478_25
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18806..19525
DNA (720bp) protein (240aa)
RNA methyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI0003690F94
RNA methyltransferase, TrmH family, group 1 rbh
RNA methyltransferase, TrmH family, group 1 {ECO:0000313|EMBL:ACV48879.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halom
qs_4_scaffold_478_26
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20081..21589)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P088_HALMD
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV48880.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_478_27
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21678..23546)
DNA (1869bp) protein (623aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000256|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000256|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00588};; TaxID=485914
Glutamyl-tRNA(Gln) amidotransferase subunit E n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P089_HALMD
glutamyl-tRNA(Gln) amidotransferase subunit E rbh
qs_4_scaffold_478_28
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23567..24517
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003822225
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48882.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
qs_4_scaffold_478_29
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24639..25493
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003822225
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48882.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
qs_4_scaffold_478_30
unknown

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25505..25651
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 30 items

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