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qs_4_scaffold_1773

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1773_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..358
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6M0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30342.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_1773_2
unknown

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comp(355..708)
DNA (354bp) protein (118aa)

This feature has no annotations

qs_4_scaffold_1773_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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997..1233
DNA (237bp) protein (79aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit H n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIH9_9EURY
DNA-directed RNA polymerase, subunit H, RpoH/RPB5
qs_4_scaffold_1773_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1235..2713
DNA (1479bp) protein (493aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:ELZ22437.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ22437.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit B n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJ99_9EURY
DNA-directed RNA polymerase subunit beta''
qs_4_scaffold_1773_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2715..3326
DNA (612bp) protein (204aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
rpoB; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IWN6_9EURY
qs_4_scaffold_1773_6
Halobacteriaceae archaeon YGH44, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3284..4471
DNA (1188bp) protein (396aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1198300 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
rpoB; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
RNA polymerase subunit B n=1 Tax=Halosimplex pelagicum RepID=U3MZ65_9EURY
qs_4_scaffold_1773_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4471..7488
DNA (3018bp) protein (1006aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA-directed RNA polymerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGM0_9EURY
DNA-directed RNA polymerase subunit A'
qs_4_scaffold_1773_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7491..10154
DNA (2664bp) protein (888aa)
RNA polymerase Rpb1 domain 5 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTX7_HALUD
RNA polymerase Rpb1 domain 5
RNA polymerase Rpb1 domain 5 {ECO:0000313|EMBL:ACV10966.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
qs_4_scaffold_1773_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10162..10596
DNA (435bp) protein (145aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIH0_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source=
transcription elongation factor NusA
qs_4_scaffold_1773_10
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10685..11074)
DNA (390bp) protein (130aa)
PilT protein domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NM81_HALUD
PilT protein domain protein
PilT protein domain protein {ECO:0000313|EMBL:ACV11289.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (
qs_4_scaffold_1773_11
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11071..11316)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A0M1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY91382.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
hypothetical protein
qs_4_scaffold_1773_12
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11329..11586)
DNA (258bp) protein (86aa)
Putative multicopper oxidase {ECO:0000313|EMBL:AGB15804.1}; Flags: Precursor;; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax r
Displaying 12 items

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