ggKbase home page

qs_4_scaffold_570

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_570_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..569)
DNA (567bp) protein (189aa)
Mannose-1-phosphate guanylyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWB9_9EURY
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:ELZ27501.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
mannose-1-phosphate guanyltransferase
qs_4_scaffold_570_2
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1038..1661
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B3Z6_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELZ05505.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
Methyltransferase type 11
qs_4_scaffold_570_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1957..2889
DNA (933bp) protein (311aa)
Replication factor A n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJY2_9EURY
replication factor A
Replication factor A {ECO:0000313|EMBL:CCQ33539.1}; Replication factor A protein {ECO:0000313|EMBL:ERJ07511.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
qs_4_scaffold_570_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2889..3512
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWF4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27510.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_570_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3550..3981
DNA (432bp) protein (144aa)
CopG family transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWC7_9EURY
CopG family transcriptional regulator {ECO:0000313|EMBL:ELZ27511.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
CopG family protein
qs_4_scaffold_570_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4158..4832
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JIL5_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA08851.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_4_scaffold_570_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4875..5813)
DNA (939bp) protein (313aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:ELZ28115.1}; EC=2.6.1.42 {ECO:0000313|EMBL:ELZ28115.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
Branched-chain amino acid aminotransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY25_9EURY
branched-chain amino acid aminotransferase
qs_4_scaffold_570_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6060..6335
DNA (276bp) protein (92aa)
Pterin-4-alpha-carbinolamine dehydratase {ECO:0000313|EMBL:ELZ24823.1}; EC=4.2.1.96 {ECO:0000313|EMBL:ELZ24823.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
Pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQA7_9EURY
phhB; pterin-4-alpha-carbinolamine dehydratase
qs_4_scaffold_570_9
unknown

Not on your lists

6335..6529
DNA (195bp) protein (65aa)

This feature has no annotations

qs_4_scaffold_570_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6558..7205
DNA (648bp) protein (216aa)
3-phosphoglycerate kinase n=1 Tax=Halomicrobium katesii RepID=UPI000370B49E
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ACV47723.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source
qs_4_scaffold_570_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7191..7751)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNQ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24881.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_570_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8233..12183)
DNA (3951bp) protein (1317aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=797114 species="Archaea; Euryarch
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucyl-tRNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSN1_9EURY
qs_4_scaffold_570_13

Not on your lists

12329..14473
DNA (2145bp) protein (715aa)
Beta-fructosidases (Levanase/invertase) n=1 Tax=uncultured archaeon A07HR67 RepID=V4XTF5_9ARCH
Beta-fructosidases (Levanase/invertase) {ECO:0000313|EMBL:ESS03416.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
glycosyl hydrolase family 32
qs_4_scaffold_570_14
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14500..15846)
DNA (1347bp) protein (449aa)
Levansucrase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J075_HALVA
Levansucrase {ECO:0000313|EMBL:EMA01424.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;"
levansucrase
qs_4_scaffold_570_15

Not on your lists

16067..16378
DNA (312bp) protein (104aa)
Universal stress protein UspA related nucleotide-binding protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XXW5_9ARCH
Universal stress protein UspA related nucleotide-binding protein {ECO:0000313|EMBL:ESS03417.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
universal stress protein uspa-like protein
qs_4_scaffold_570_16
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(16516..17976)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Paenibacillus sp. JC66 RepID=UPI00028A0867
glucosyl hydrolase family protein Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
glucosyl hydrolase family protein
qs_4_scaffold_570_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18113..18691)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUQ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25604.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_570_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18691..20970)
DNA (2280bp) protein (760aa)
tRNA(Met) cytidine acetyltransferase TmcA {ECO:0000256|HAMAP-Rule:MF_01886}; EC=2.3.1.193 {ECO:0000256|HAMAP-Rule:MF_01886};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
Putative tRNA(Met) cytidine acetyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT1_9EURY
hypothetical protein
qs_4_scaffold_570_19
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21645..22085
DNA (441bp) protein (147aa)
2-nitropropane dioxygenase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KRY1_HALAR
2-nitropropane dioxygenase {ECO:0000313|EMBL:EMA23703.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis
npd; 2-nitropropane dioxygenase
qs_4_scaffold_570_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


22361..22723
DNA (363bp) protein (121aa)
50S ribosomal protein L7Ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQV5_9EURY
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
rpl7ae; 50S ribosomal protein L7Ae
qs_4_scaffold_570_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


22730..22960
DNA (231bp) protein (77aa)
30S ribosomal protein S28e n=2 Tax=Halobacteriaceae RepID=M0CT81_9EURY
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
30S ribosomal protein S28e
qs_4_scaffold_570_22
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22960..23469
DNA (510bp) protein (170aa)
30S ribosomal protein L24e n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP40_9EURY
30S ribosomal protein L24e
30S ribosomal protein L24e {ECO:0000313|EMBL:CCQ32792.1}; 50S ribosomal protein L24e {ECO:0000313|EMBL:ERJ07172.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
qs_4_scaffold_570_23
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23576..23995
DNA (420bp) protein (140aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTU9_HALUD
qs_4_scaffold_570_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24718..25179)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCW2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20202.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_570_25
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26161..27060
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PHK8_9EURY
conserved hypothetical protein (DUF4380)
Uncharacterized protein {ECO:0000313|EMBL:ERJ05609.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qs_4_scaffold_570_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27215..28228
DNA (1014bp) protein (338aa)
Phosphotransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQW0_9EURY
Phosphotransferase {ECO:0000313|EMBL:ELZ25611.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
phosphotransferase
qs_4_scaffold_570_27
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28321..28992
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MSS9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA48408.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_4_scaffold_570_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28995..30791
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT86_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25612.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_570_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30778..31596
DNA (819bp) protein (273aa)
ABC transporter ATP-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSJ9_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ25613.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
ABC transporter ATP-binding protein
qs_4_scaffold_570_30
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31596..32756
DNA (1161bp) protein (387aa)
ABC transporter permease n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUQ9_9EURY
ABC transporter permease {ECO:0000313|EMBL:ELZ25614.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2
abcP-1; ABC transporter permease protein
Displaying items 1-30 of 74 in total

View Taxonomy