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qs_4_scaffold_1346

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1346_1
unknown

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comp(3..77)
DNA (75bp) protein (25aa)

This feature has no annotations

qs_4_scaffold_1346_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(229..1059)
DNA (831bp) protein (277aa)
RNA 3'-terminal phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEW6_9EURY
qs_4_scaffold_1346_3
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1236..2279
DNA (1044bp) protein (348aa)
Pyruvate dehydrogenase E1 component, alpha subunit n=1 Tax=Natronococcus occultus SP4 RepID=L0JUA8_9EURY
pyruvate dehydrogenase E1 component, alpha subunit
Pyruvate dehydrogenase E1 component, alpha subunit {ECO:0000313|EMBL:AGB36321.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natr
qs_4_scaffold_1346_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2331..2561)
DNA (231bp) protein (77aa)
Lrp/AsnC family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRB5_NATPD
transcription regulator
Lrp/AsnC family transcription regulator {ECO:0000313|EMBL:CAI49328.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
qs_4_scaffold_1346_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2644..3333
DNA (690bp) protein (230aa)
TrkA-N domain-containing protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LJF3_9EURY
TRK potassium uptake system protein {ECO:0000313|EMBL:EFW94118.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus p
TrkA-N domain-containing protein
qs_4_scaffold_1346_6
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3334..3567
DNA (234bp) protein (78aa)
Transcriptional regulator, AsnC family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NN53_HALUD
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACV11453.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus
qs_4_scaffold_1346_7

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comp(3549..4856)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MI84_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07195.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_4_scaffold_1346_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4846..5577)
DNA (732bp) protein (244aa)
alanine--tRNA ligase id=24614245 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Alanine--tRNA ligase {ECO:0000313|EMBL:ESP89328.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum
Alanyl-tRNA synthetase, class IIc-like protein
qs_4_scaffold_1346_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5689..6387
DNA (699bp) protein (233aa)
HD family hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISH7_NATPD
hypothetical protein
HD family hydrolase {ECO:0000313|EMBL:CAI48909.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_4_scaffold_1346_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6430..7128)
DNA (699bp) protein (233aa)
Threonine efflux protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXV0_9EURY
Threonine efflux protein {ECO:0000313|EMBL:ELZ27277.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
L-lysine exporter
qs_4_scaffold_1346_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7337..8089
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR21_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25068.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_1346_12
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8441..9070
DNA (630bp) protein (210aa)
Chaperone protein DnaJ n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L840_HALJP
Chaperone protein DnaJ {ECO:0000313|EMBL:EMA22127.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM
dnaJ2; chaperone protein DnaJ
qs_4_scaffold_1346_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9067..9282
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISI2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48904.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_4_scaffold_1346_14
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9494..10180
DNA (687bp) protein (229aa)
Metallophosphoesterase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KMC1_9EURY
Metallophosphoesterase {ECO:0000313|EMBL:EMA20945.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 1
hypothetical protein
qs_4_scaffold_1346_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10175..11428)
DNA (1254bp) protein (418aa)
crtI_3; phytoene dehydrogenase 3 (phytoene desaturase) (EC:1.14.99.-)
Phytoene dehydrogenase (Phytoene desaturase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISI0_NATPD
Amine oxidase family protein {ECO:0000313|EMBL:CAI48906.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
Displaying 15 items

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