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qs_4_scaffold_1494

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1494_1
unknown

Not on your lists

comp(1..237)
DNA (237bp) protein (79aa)

This feature has no annotations

qs_4_scaffold_1494_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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650..1135
DNA (486bp) protein (162aa)
Transposase (TCE33) n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KU82_9EURY
ISH7-type transposase
Transposase (TCE33) {ECO:0000313|EMBL:EMA24872.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 3379
qs_4_scaffold_1494_3
unknown

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comp(1331..1447)
DNA (117bp) protein (39aa)

This feature has no annotations

qs_4_scaffold_1494_4

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comp(1777..2724)
DNA (948bp) protein (316aa)
Transcription initiation factor IIB n=1 Tax=uncultured archaeon A07HB70 RepID=V4XZ35_9ARCH
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archa
tfb2; transcription initiation factor TFB
qs_4_scaffold_1494_5
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2969..3835)
DNA (867bp) protein (289aa)
Amino acid permease-associated region n=1 Tax=Halobacterium sp. DL1 RepID=G4IGJ5_9EURY
Amino acid transporter {ECO:0000313|EMBL:AHG04482.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
amino acid transporter
qs_4_scaffold_1494_6
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3857..4213)
DNA (357bp) protein (119aa)
Amino acid transporter n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HGE1_9EURY
Amino acid transporter {ECO:0000313|EMBL:ELZ82144.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
cat2; cationic amino acid transporter
qs_4_scaffold_1494_7
unknown

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comp(4220..4612)
DNA (393bp) protein (131aa)

This feature has no annotations

qs_4_scaffold_1494_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4783..4965
DNA (183bp) protein (61aa)
TRK potassium uptake system protein TrkH n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUV8_9EURY
TRK potassium uptake system protein TrkH {ECO:0000313|EMBL:EMA36159.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
cation transporter
qs_4_scaffold_1494_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4972..5169)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ32451.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
qs_4_scaffold_1494_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5166..6749)
DNA (1584bp) protein (528aa)
Potassium transport system protein trkH1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIK8_9EURY
Potassium transport system protein trkH1 {ECO:0000313|EMBL:ELZ23115.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
cation transporter
qs_4_scaffold_1494_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6736..7443)
DNA (708bp) protein (236aa)
K+ transporter, NAD-binding protein n=1 Tax=Halogranum salarium B-1 RepID=J3EYF3_9EURY
K+ transporter, NAD-binding protein {ECO:0000313|EMBL:EJN60367.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
trkA1; Trk potassium uptake system protein
qs_4_scaffold_1494_12
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7591..8619)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZXL7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ06252.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
hypothetical protein
qs_4_scaffold_1494_13
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8826..10346)
DNA (1521bp) protein (507aa)
TrkA-C domain-containing protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BKS9_9EURY
TrkA-C domain-containing protein {ECO:0000313|EMBL:ELZ10239.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermot
TrkA-C domain-containing protein
qs_4_scaffold_1494_14
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10592..11191)
DNA (600bp) protein (200aa)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=1 Tax=Natronococcus occultus SP4 RepID=L0JT81_9EURY
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:AGB36222.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.
qs_4_scaffold_1494_15

Not on your lists

comp(11230..11835)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XCE4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS05604.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
KaiC-like transcriptional regulator
qs_4_scaffold_1494_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11925..12995)
DNA (1071bp) protein (357aa)
trpD_3; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Probable phosphoribosyltransferase (Homolog to anthranilate phosphoribosyltransferase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQH4_NATPD
Probable phosphoribosyltransferase (Homolog to anthranilate phosphoribosyltransferase) {ECO:0000313|EMBL:CAI49622.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
qs_4_scaffold_1494_17
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13089..14042)
DNA (954bp) protein (318aa)
Uncharacterized protein n=5 Tax=Haloferax RepID=L5NZ07_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELK55737.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. BAB2207.;"
hypothetical protein
qs_4_scaffold_1494_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14518..14685
DNA (168bp) protein (56aa)
Siroheme decarboxylase AhbA n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQH3_NATPD
nirG protein homolog / nirH protein
Siroheme decarboxylase AhbA {ECO:0000313|EMBL:CAI49623.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
Displaying 18 items

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