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qs_4_scaffold_2277

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_2277_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..235
DNA (234bp) protein (78aa)
AAA-type ATPase (CDC48 subfamily) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INW9_NATPD
AAA-type ATPase (transitional ATPase homolog)
AAA-type ATPase (CDC48 subfamily) {ECO:0000313|EMBL:CAI50183.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pha
qs_4_scaffold_2277_2
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(275..1180)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PFG6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA68816.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
qs_4_scaffold_2277_3
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1330..2475
DNA (1146bp) protein (382aa)
Mandelate racemase/muconate lactonizing enzyme family protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L671_HALJP
Mandelate racemase/muconate lactonizing enzyme family protein {ECO:0000313|EMBL:EMA29011.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.
mandelate racemase
qs_4_scaffold_2277_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2728..5562)
DNA (2835bp) protein (945aa)
ATP-dependent DNA helicase {ECO:0000313|EMBL:CAI50092.2}; EC=3.6.4.12 {ECO:0000313|EMBL:CAI50092.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
lhr; Lhr-like helicase (EC:3.6.1.-)
ATP-dependent DNA helicase n=2 Tax=Natronomonas pharaonis RepID=Q3IP60_NATPD
qs_4_scaffold_2277_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6031..6375)
DNA (345bp) protein (115aa)
Probable transcription factor (Homolog to RNA polymerase III subunit RPC34) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQX2_NATPD
hypothetical protein
Probable transcription factor (Homolog to RNA polymerase III subunit RPC34) {ECO:0000313|EMBL:CAI49472.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
qs_4_scaffold_2277_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7205..8743)
DNA (1539bp) protein (513aa)
2-succinylbenzoate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_00731}; EC=6.2.1.26 {ECO:0000256|HAMAP-Rule:MF_00731};; o-succinylbenzoyl-CoA synthetase {ECO:0000256|HAMAP-Rule:MF_00731}; TaxID=797209 speci
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
O-succinylbenzoic acid--CoA ligase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWV9_9EURY
qs_4_scaffold_2277_7
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8736..9053)
DNA (318bp) protein (106aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PIU9_9EURY
menC; O-succinylbenzoate-CoA synthase (OSB synthase; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase)
Displaying 7 items

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