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qs_4_scaffold_3536

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_3536_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..140
DNA (138bp) protein (46aa)
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
qs_4_scaffold_3536_2
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(219..488)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NNN7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA59527.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
qs_4_scaffold_3536_3
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(608..2341)
DNA (1734bp) protein (578aa)
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LU03_9EURY
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000256|HAMAP-Rule:MF_01447}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; H
O-sialoglycoprotein endopeptidase
qs_4_scaffold_3536_4
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2338..2472)
DNA (135bp) protein (45aa)
30S ribosomal protein S27ae n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8U9_HALJB
30S ribosomal protein S27ae
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus
qs_4_scaffold_3536_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2473..2811)
DNA (339bp) protein (113aa)
30S ribosomal protein S24e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY38_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
30S ribosomal protein S24e
qs_4_scaffold_3536_6
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3341..3628)
DNA (288bp) protein (96aa)
Translation initiation factor 1A n=12 Tax=Haloferax RepID=D4GRU5_HALVD
tif1A2; translation initiation factor aIF-1A
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofera
qs_4_scaffold_3536_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4037..4690)
DNA (654bp) protein (218aa)
UPF0218 protein C444_00647 n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LNY7_HALJP
UPF0218 protein C444_00647 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica
hypothetical protein
qs_4_scaffold_3536_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4691..5257)
DNA (567bp) protein (189aa)
rpoE1; DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:CAI50631.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI50631.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit E n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMM7_NATPD
qs_4_scaffold_3536_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5259..5630)
DNA (372bp) protein (124aa)
DUF188 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMM6_NATPD
rpo operon protein
DUF188 family protein {ECO:0000313|EMBL:CAI50632.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
qs_4_scaffold_3536_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5627..6856)
DNA (1230bp) protein (410aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP22_NATM8
tif2g; translation initiation factor aIF-2 gamma subunit
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=268739 species="Arch
Displaying 10 items

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