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qs_4_scaffold_813

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_813_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..327
DNA (327bp) protein (109aa)
Acyl-CoA dehydrogenase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L9S6_HALJP
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA30326.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131
acyl-CoA dehydrogenase
qs_4_scaffold_813_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

403..936
DNA (534bp) protein (178aa)
HAD-superfamily hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNW0_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:ELZ24955.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
HAD-superfamily hydrolase
qs_4_scaffold_813_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(906..1139)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K1W3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH35432.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
qs_4_scaffold_813_4
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1369..1977
DNA (609bp) protein (203aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_001
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DVK7_9EURY
qs_4_scaffold_813_5
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1974..2741)
DNA (768bp) protein (256aa)
Alpha/beta hydrolase fold protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E379_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ELZ41397.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovo
hydrolase or acyltransferase of alpha/beta superfamily protein
qs_4_scaffold_813_6
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2942..3178
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003645960
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ09760.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
qs_4_scaffold_813_7
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3175..5361
DNA (2187bp) protein (729aa)
ATPase AAA (EC:3.6.4.3)
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:AEH35404.1}; EC=3.6.4.3 {ECO:0000313|EMBL:AEH35404.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Ha
AAA family ATPase, CDC48 subfamily n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6X5_HALXS
qs_4_scaffold_813_8
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5666..6241)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DAU0_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH37035.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
qs_4_scaffold_813_9
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6580..7401)
DNA (822bp) protein (274aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HX41_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB65455.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
qs_4_scaffold_813_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7398..8582)
DNA (1185bp) protein (395aa)
DNA primase small subunit PriS {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00011001}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00044138};; TaxID=1227453 species="Ar
DNA primase small subunit PriS n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L839_HALJP
DNA primase
qs_4_scaffold_813_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8993..9478)
DNA (486bp) protein (162aa)
fadB_2; enoyl-CoA hydratase II 2 (EC:4.2.1.17)
MaoC family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQX4_NATPD
MaoC domain protein {ECO:0000313|EMBL:CAI49470.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_4_scaffold_813_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9475..10056)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQX5_NATPD
hypothetical protein
PaaI family protein {ECO:0000313|EMBL:CAI49469.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_4_scaffold_813_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10053..12014)
DNA (1962bp) protein (654aa)
hbd_2; 3-hydroxyacyl-CoA dehydrogenase 2/enoyl-CoA hydratase I 2 (EC:1.1.1.35 4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase {ECO:0000313|EMBL:CAI49468.1}; EC=1.1.1.35 {ECO:0000313|EMBL:CAI49468.1};; EC=4.2.1.17 {ECO:0000313|EMBL:CAI49468.1};; TaxID=348780 species="Archa
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQX6_NATPD
qs_4_scaffold_813_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12438..12722
DNA (285bp) protein (95aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
rpoL; DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M148_9EURY
qs_4_scaffold_813_15
unknown

Not on your lists

comp(12847..13023)
DNA (177bp) protein (59aa)

This feature has no annotations

qs_4_scaffold_813_16
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13432..14247)
DNA (816bp) protein (272aa)
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W070_9EURY
qs_4_scaffold_813_17
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14467..14811)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D4Q4_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH37523.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
qs_4_scaffold_813_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14930..15208
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NJE7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56805.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_4_scaffold_813_19
unknown

Not on your lists

15330..15596
DNA (267bp) protein (89aa)

This feature has no annotations

qs_4_scaffold_813_20
unknown

Not on your lists

comp(15601..16251)
DNA (651bp) protein (217aa)

This feature has no annotations

qs_4_scaffold_813_21
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16414..17211)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V266_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46386.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qs_4_scaffold_813_22
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17319..18338)
DNA (1020bp) protein (340aa)
Integrase family protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNQ0_HALUD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACV11575.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (str
qs_4_scaffold_813_23
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18725..18907)
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA31991.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
qs_4_scaffold_813_24
unknown

Not on your lists

19008..19187
DNA (180bp) protein (60aa)

This feature has no annotations

qs_4_scaffold_813_25
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19262..20407)
DNA (1146bp) protein (382aa)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I9V4_HALRX
glycine/D-amino acid oxidase, deaminating
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:AGB15021.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (
qs_4_scaffold_813_26
unknown

Not on your lists

comp(20516..20944)
DNA (429bp) protein (143aa)

This feature has no annotations

qs_4_scaffold_813_27
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21743..23200)
DNA (1458bp) protein (486aa)
Membrane lipoprotein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PH79_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH97806.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
hypothetical protein
qs_4_scaffold_813_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23367..24089
DNA (723bp) protein (241aa)
ABC-type transport system periplasmic substrate-binding protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQL1_NATPD
dipeptide/oligopeptide/nickel ABC transporter periplasmic substrate-binding protein
ABC-type transport system periplasmic substrate-binding protein (Probable substrate dipeptide/oligopeptide) {ECO:0000313|EMBL:CAI49584.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; H
Displaying 28 items

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