ggKbase home page

qs_4_scaffold_856

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_856_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

256..1470
DNA (1215bp) protein (405aa)
Major facilitator superfamily protein n=2 Tax=Halobiforma lacisalsi RepID=M0LPV2_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:EMA34065.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisal
major facilitator superfamily protein
qs_4_scaffold_856_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1558..2577
DNA (1020bp) protein (340aa)
ABC transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU99_9EURY
ABC transporter {ECO:0000313|EMBL:EMA49317.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ABC transporter
qs_4_scaffold_856_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2574..3467
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X4W6_9EURY
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV46921.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_856_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3501..4718)
DNA (1218bp) protein (406aa)
agxT; aminotransferase class V (serine--pyruvate aminotransferase / alanine--glyoxylate aminotransferase) (EC:2.6.1.-)
Alanine--glyoxylate transaminase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4F1_9EURY
Alanine--glyoxylate transaminase {ECO:0000313|EMBL:EMA52822.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailan
qs_4_scaffold_856_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4927..7017
DNA (2091bp) protein (697aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=797114 species="Archaea;
NAD-dependent DNA ligase (EC:6.5.1.2)
NAD-dependent DNA ligase LigA n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZ46_9EURY
qs_4_scaffold_856_6
unknown

Not on your lists

comp(7092..7286)
DNA (195bp) protein (65aa)

This feature has no annotations

qs_4_scaffold_856_7
unknown

Not on your lists

comp(7422..7658)
DNA (237bp) protein (79aa)

This feature has no annotations

qs_4_scaffold_856_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7867..9546)
DNA (1680bp) protein (560aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3T3_HALMD
methyl-accepting chemotaxis sensory transducer rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACV47755.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Ha
qs_4_scaffold_856_9
unknown

Not on your lists

comp(9965..10189)
DNA (225bp) protein (75aa)

This feature has no annotations

qs_4_scaffold_856_10
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10195..11550)
DNA (1356bp) protein (452aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.
Glutamine synthetase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LV44_9EURY
glutamine synthetase, type I
qs_4_scaffold_856_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11838..13046)
DNA (1209bp) protein (403aa)
Major facilitator superfamily transporter n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1M4_9EURY
Major facilitator superfamily transporter {ECO:0000313|EMBL:EMA50580.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
dld; sugar and other transporter
qs_4_scaffold_856_12
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13379..14503
DNA (1125bp) protein (375aa)
aminoglycoside phosphotransferase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00035E6AF4
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABM58607.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobact
qs_4_scaffold_856_13
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

14500..16056
DNA (1557bp) protein (519aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; enolase (EC:4.2.1.11)
Enolase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2F2_AZOS1
Displaying 13 items

View Taxonomy