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qs_4_scaffold_4517

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_4517_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..291)
DNA (291bp) protein (97aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMN7_HALBP
peptide ABC transporter substrate-binding protein
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:ADQ66192.1}; Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELY27313.1}; Flags: Precursor;; TaxID=4693
qs_4_scaffold_4517_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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829..1797
DNA (969bp) protein (323aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=348780 species="Archaea; Euryarchaeo
DNA topoisomerase 1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT32_NATPD
qs_4_scaffold_4517_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1990..3327
DNA (1338bp) protein (446aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=348780 species="Archaea; Euryarchaeo
DNA topoisomerase 1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT32_NATPD
qs_4_scaffold_4517_4
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3597..4253
DNA (657bp) protein (219aa)
Geranylgeranylglyceryl phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000255|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000255|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:00
Geranylgeranylglyceryl phosphate synthase n=2 Tax=Haloarcula marismortui RepID=GGGPS_HALMA
pcrB; geranylgeranylglyceryl phosphate synthase-like protein
qs_4_scaffold_4517_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4264..5868
DNA (1605bp) protein (535aa)
gpmA; phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=GPMI_NATPD
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000255|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000255|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000255|HA
qs_4_scaffold_4517_6
unknown

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6043..6282
DNA (240bp) protein (80aa)

This feature has no annotations

qs_4_scaffold_4517_7
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6379..7026)
DNA (648bp) protein (216aa)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000256|PIRNR:PIRNR006250}; EC=2.4.2.19 {ECO:0000256|PIRNR:PIRNR006250};; Quinolinate phosphoribosyltransferase [decarboxylating] {ECO:0000
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FCV9_9EURY
qs_4_scaffold_4517_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7145..8959)
DNA (1815bp) protein (605aa)
nadB; L-aspartate oxidase, quinolinate synthetase subunit B (EC:1.4.3.16)
L-aspartate oxidase {ECO:0000313|EMBL:CAI49299.1}; EC=1.4.3.16 {ECO:0000313|EMBL:CAI49299.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
L-aspartate oxidase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRE4_NATPD
qs_4_scaffold_4517_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8961..9467)
DNA (507bp) protein (169aa)
nadA; quinolinate synthetase (EC:4.1.99.-)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Quinolinate synthase A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRE3_NATPD
Displaying 9 items

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