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qs_4_scaffold_3589

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_3589_1
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(157..582)
DNA (426bp) protein (142aa)
mRNA 3'-end processing factor n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WWR2_9EURY
mRNA 3'-end processing factor {ECO:0000313|EMBL:ELY53919.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolytic
hypothetical protein
qs_4_scaffold_3589_2
unknown

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788..1240
DNA (453bp) protein (151aa)

This feature has no annotations

qs_4_scaffold_3589_3

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comp(1184..1705)
DNA (522bp) protein (174aa)
DNA ligase {ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|RuleBase:RU000617};; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
DNA ligase I, ATP-dependent, dnl1 n=1 Tax=uncultured archaeon A07HR67 RepID=V4X5J1_9ARCH
DNA ligase I, ATP-dependent Dnl1
qs_4_scaffold_3589_4
unknown

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1935..2543
DNA (609bp) protein (203aa)

This feature has no annotations

qs_4_scaffold_3589_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2970..3851)
DNA (882bp) protein (294aa)
Cytochrome c oxidase subunit II n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFQ3_9EURY
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:EMA44208.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
cytochrome c oxidase subunit II
qs_4_scaffold_3589_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3996..5450
DNA (1455bp) protein (485aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
ctaB; protoheme IX geranylgeranyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MT84_9EURY
qs_4_scaffold_3589_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5541..5972
DNA (432bp) protein (144aa)
Ntp pyrophosphohydrolase n=1 Tax=Halogranum salarium B-1 RepID=J2ZL60_9EURY
Ntp pyrophosphohydrolase {ECO:0000313|EMBL:EJN61480.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
NUDIX hydrolase
qs_4_scaffold_3589_8
unknown

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comp(5977..6105)
DNA (129bp) protein (43aa)

This feature has no annotations

qs_4_scaffold_3589_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6332..6754
DNA (423bp) protein (141aa)
Prefoldin subunit beta n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N815_9EURY
prefoldin, beta subunit, archaeal
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
qs_4_scaffold_3589_10
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6861..7034
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AAN2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY94932.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
qs_4_scaffold_3589_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7109..7588
DNA (480bp) protein (160aa)
cellulase (EC:3.2.1.4)
Peptidase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXV7_9EURY
Peptidase {ECO:0000313|EMBL:ELZ27282.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
Displaying 11 items

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