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qs_4_scaffold_5553

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_5553_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..426)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N3N3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52148.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_4_scaffold_5553_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(423..1208)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4V8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52149.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_4_scaffold_5553_3
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1216..1737)
DNA (522bp) protein (174aa)
Transcription factor E n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MDU9_9EURY
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
tfeA; transcription initiation factor IIE subunit alpha
qs_4_scaffold_5553_4
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1986..2903
DNA (918bp) protein (306aa)
Putative ribose 1,5-bisphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00304}; EC=5.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00304};; Ribulose 1,5-bisphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00304}; TaxI
Putative ribose 1,5-bisphosphate isomerase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JMY6_NATP1
thiazole biosynthesis enzyme
qs_4_scaffold_5553_5
unknown

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comp(2983..3189)
DNA (207bp) protein (69aa)

This feature has no annotations

qs_4_scaffold_5553_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3672..4433
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46727.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_4_scaffold_5553_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4551..5147
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHD5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60891.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
phosphinothricin N-acetyltransferase
qs_4_scaffold_5553_8
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5182..5325)
DNA (144bp) protein (48aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TRM56_NATPD
tRNA methyltransferase
Displaying 8 items

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