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qs_4_scaffold_9878

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_9878_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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275..577
DNA (303bp) protein (101aa)
50S ribosomal protein L21e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ63_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
rpl21e; 50S ribosomal protein L21e
qs_4_scaffold_9878_2
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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574..930
DNA (357bp) protein (119aa)
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:ELY39667.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELY39667.1};; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae
DNA-directed RNA polymerase, subunit F n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y0E3_9ARCH
qs_4_scaffold_9878_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1048..1677
DNA (630bp) protein (210aa)
RNA-binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2L9_9EURY
RNA-binding protein {ECO:0000313|EMBL:EMA38859.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
RNA-binding protein
qs_4_scaffold_9878_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1841..2152
DNA (312bp) protein (104aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXB8_9EURY
Suspect SCG annotation. See neighboring gene [qs_4_scaffold_9878_5].
ksgA; dimethyladenosine transferase
qs_4_scaffold_9878_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2095..2700
DNA (606bp) protein (202aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZ69_9EURY
ksgA; dimethyladenosine transferase
qs_4_scaffold_9878_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2697..3554
DNA (858bp) protein (286aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HH12_9EURY
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:ESP87134.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
mechanosensitive ion channel protein MscS
Displaying 6 items

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