ggKbase home page

qs_5_scaffold_107

Search features with annotation key words

Displaying items 1-30 of 44 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_107_1
unknown

Not on your lists

44..751
DNA (708bp) protein (236aa)

This feature has no annotations

qs_5_scaffold_107_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(894..1556)
DNA (663bp) protein (221aa)
Integrase family protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJD8_9EURY
Integrase {ECO:0000313|EMBL:AHG05580.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
XerC/D-like integrase
qs_5_scaffold_107_3
unknown

Not on your lists

comp(1704..1895)
DNA (192bp) protein (64aa)

This feature has no annotations

qs_5_scaffold_107_4
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1908..2552)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JL64_HALVA
Uncharacterized protein {ECO:0000313|EMBL:KKF39900.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
qs_5_scaffold_107_5
unknown

Not on your lists

2906..3796
DNA (891bp) protein (297aa)

This feature has no annotations

qs_5_scaffold_107_6
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3881..5107
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6CV77_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH98690.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
hypothetical protein
qs_5_scaffold_107_7
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5178..5468)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GAQ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ68623.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;
qs_5_scaffold_107_8
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5472..6137)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GAQ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH98693.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
hypothetical protein
qs_5_scaffold_107_9
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6678..8402)
DNA (1725bp) protein (575aa)
TraD protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LEF1_HALJP
TraD protein {ECO:0000313|EMBL:EMA31936.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
TraD protein
qs_5_scaffold_107_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8399..8965)
DNA (567bp) protein (189aa)
Relaxase/mobilization nuclease domain-containing protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=L9VN16_HALJB
Relaxase/mobilization nuclease domain-containing protein {ECO:0000313|EMBL:ELY38600.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;
relaxase/mobilization nuclease domain-containing protein
qs_5_scaffold_107_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8962..9564)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JC56_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16963.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_5_scaffold_107_12
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9993..10301
DNA (309bp) protein (103aa)
AbrB family transcriptional regulator n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F0K9_9EURY
AbrB family transcriptional regulator {ECO:0000313|EMBL:ELZ53465.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochst
AbrB family transcription regulator
qs_5_scaffold_107_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10298..10726
DNA (429bp) protein (143aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LEB2_HALJP
hypothetical protein
qs_5_scaffold_107_14
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10754..11629)
DNA (876bp) protein (292aa)
Metallophosphoesterase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LEB4_HALJP
Metallophosphoesterase {ECO:0000313|EMBL:EMA31907.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131
metallophosphoesterase
qs_5_scaffold_107_15
unknown

Not on your lists

12105..12221
DNA (117bp) protein (39aa)

This feature has no annotations

qs_5_scaffold_107_16
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12701..12925)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJE9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05573.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qs_5_scaffold_107_17
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13138..13725
DNA (588bp) protein (196aa)
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8T9_HALXS
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:AEH37999.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;"
qs_5_scaffold_107_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13794..14486
DNA (693bp) protein (231aa)
Uncharacterized protein id=24615214 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88378.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
qs_5_scaffold_107_19
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14483..16030
DNA (1548bp) protein (516aa)
N-6 DNA methylase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NP01_HALUD
N-6 DNA methylase
N-6 DNA methylase {ECO:0000313|EMBL:ACV10292.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strain DSM
qs_5_scaffold_107_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16023..17414
DNA (1392bp) protein (464aa)
Type I restriction-modification system, S subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEV8_9EURY
Type I restriction-modification system, S subunit {ECO:0000313|EMBL:EMA44256.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
type I restriction modification system subunit S
qs_5_scaffold_107_21
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17407..20442
DNA (3036bp) protein (1012aa)
rmeR; type I site-specific deoxyribonuclease subunit rmeR; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] id=24615211 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
rmeR; type I site-specific deoxyribonuclease subunit rmeR (EC:3.1.21.3)
Type I site-specific deoxyribonuclease subunit rmeR {ECO:0000313|EMBL:ESP88375.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.
qs_5_scaffold_107_22
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20445..21152
DNA (708bp) protein (236aa)
hypothetical protein; K07043 id=24615210 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88374.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_5_scaffold_107_23
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21149..21682)
DNA (534bp) protein (178aa)
Transcription factor n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZEN4_9EURY
Transcription factor {ECO:0000313|EMBL:ELY83643.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
tata-box binding protein
qs_5_scaffold_107_24
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21871..22419)
DNA (549bp) protein (183aa)
Transcription factor n=1 Tax=Natrinema gari JCM 14663 RepID=L9YUR1_9EURY
Transcription factor {ECO:0000313|EMBL:ELY77935.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
tbpE; TATA-binding transcription initiation factor
qs_5_scaffold_107_25
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22564..24003)
DNA (1440bp) protein (480aa)
AAA ATPase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8F4_HALXS
ATPase AAA
AAA ATPase {ECO:0000313|EMBL:AEH35577.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 / JCM 14
qs_5_scaffold_107_26
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24333..26981
DNA (2649bp) protein (883aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VRQ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY39880.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
qs_5_scaffold_107_27
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27091..31644
DNA (4554bp) protein (1518aa)
DNA helicase-like protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CF48_9EURY
DNA helicase-like protein {ECO:0000313|EMBL:ELZ20982.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 138
hypothetical protein
qs_5_scaffold_107_28
unknown

Not on your lists

31655..31786
DNA (132bp) protein (44aa)

This feature has no annotations

qs_5_scaffold_107_29
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31783..33228
DNA (1446bp) protein (482aa)
Metallophosphoesterase n=1 Tax=Halorubrum distributum JCM 9100 RepID=M0EH99_9EURY
Metallophosphoesterase {ECO:0000313|EMBL:ELZ46272.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100.
DNA repair exonuclease
qs_5_scaffold_107_30
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

33371..36037
DNA (2667bp) protein (889aa)
DNA double-strand break repair Rad50 ATPase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K3F8_9EURY
chromosome segregation protein
DNA double-strand break repair Rad50 ATPase {ECO:0000256|HAMAP-Rule:MF_00449}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Hal
Displaying items 1-30 of 44 in total

View Taxonomy