ggKbase home page

qs_5_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_144_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..589)
DNA (588bp) protein (196aa)
Abortive infection protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDN2_9EURY
Abortive infection protein {ECO:0000313|EMBL:EMA42789.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
hypothetical protein
qs_5_scaffold_144_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

777..3434
DNA (2658bp) protein (886aa)
DNA mismatch repair protein MutS n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNF8_9EURY
DNA mismatch repair protein MutS {ECO:0000313|EMBL:ELZ24158.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsb
DNA mismatch repair protein MutS
qs_5_scaffold_144_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3567..3875)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQJ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24159.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_5_scaffold_144_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4649..4963)
DNA (315bp) protein (105aa)
Esterase/lipase-like protein id=24613422 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Esterase/lipase-like protein {ECO:0000313|EMBL:ESP90057.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus H
Esterase/lipase-like protein
qs_5_scaffold_144_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5014..8373)
DNA (3360bp) protein (1120aa)
rad25b; DNA repair helicase Rad25; K10843 DNA excision repair protein ERCC-3 [EC:3.6.4.12] id=24630107 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
DNA or RNA helicase of superfamily II {ECO:0000313|EMBL:ERG92385.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum
helicase
qs_5_scaffold_144_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8749..9612)
DNA (864bp) protein (288aa)
Fumarylacetoacetate hydrolase family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQK0_9EURY
Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:ELZ24164.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosi
2-keto-3-deoxyxylonate dehydratase
qs_5_scaffold_144_7
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10216..11541)
DNA (1326bp) protein (442aa)
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase n=1 Tax=Natronococcus occultus SP4 RepID=L0JWD8_9EURY
ribulose-5-phosphate 4-epimerase-like epimerase or aldolase
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase {ECO:0000313|EMBL:AGB37091.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" sou
qs_5_scaffold_144_8
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11573..12763)
DNA (1191bp) protein (397aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Natronococcus occultus SP4 RepID=L0JVN0_9EURY
carbohydrate ABC transporter ATP-binding protein, CUT1 family
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:AGB37092.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" s
qs_5_scaffold_144_9
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12763..13836)
DNA (1074bp) protein (358aa)
Phosphoglycerate dehydrogenase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A131_9EURY
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ELY91547.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 1
phosphoglycerate dehydrogenase-like oxidoreductase
qs_5_scaffold_144_10
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13866..14747)
DNA (882bp) protein (294aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Natronococcus occultus SP4 RepID=L0JY98_9EURY
carbohydrate ABC transporter membrane protein 2, CUT1 family
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:AGB37094.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" so
qs_5_scaffold_144_11
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14744..15679)
DNA (936bp) protein (312aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Natronococcus occultus SP4 RepID=L0JXR1_9EURY
carbohydrate ABC transporter membrane protein 1, CUT1 family
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:AGB37095.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" so
qs_5_scaffold_144_12
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15722..17167)
DNA (1446bp) protein (482aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Natronococcus occultus SP4 RepID=L0JWE2_9EURY
carbohydrate ABC transporter substrate-binding protein, CUT1 family
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:AGB37096.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcu
qs_5_scaffold_144_13
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17452..18204
DNA (753bp) protein (251aa)
ArcR family transcription regulator n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZZ08_9EURY
ArcR family transcription regulator {ECO:0000313|EMBL:ELY91544.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis
transcriptional regulator
qs_5_scaffold_144_14
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18629..19780)
DNA (1152bp) protein (384aa)
Galactonate dehydratase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZYI0_9EURY
Galactonate dehydratase {ECO:0000313|EMBL:ELY91545.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase
qs_5_scaffold_144_15
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19871..21400)
DNA (1530bp) protein (510aa)
Sugar kinase, FGGY family protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZZQ7_9EURY
Sugar kinase, FGGY family protein {ECO:0000313|EMBL:ELY91546.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DS
pentulose/hexulose kinase
qs_5_scaffold_144_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21566..22345)
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3G6_HALMD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACV47638.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicro
qs_5_scaffold_144_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22435..23463)
DNA (1029bp) protein (343aa)
Alcohol dehydrogenase n=1 Tax=Halogranum salarium B-1 RepID=J2Z9P6_9EURY
Alcohol dehydrogenase {ECO:0000313|EMBL:EJN57360.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
alcohol dehydrogenase
qs_5_scaffold_144_18
Ignisphaera aggregans, Ignisphaera, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

23635..24762
DNA (1128bp) protein (376aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0SSX2_IGNAA
sugar ABC transporter ATP-binding protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ADM27522.1}; TaxID=583356 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignispha
qs_5_scaffold_144_19
bacterium UASB270, Bacteria

Not on your lists

24813..25715
DNA (903bp) protein (301aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermotoga sp. EMP RepID=J9H1E1_9THEM
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:GAK58743.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
qs_5_scaffold_144_20
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

25712..26581
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI0003704EC0
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein Tax=Caldatribacterium californiense
binding-protein-dependent transporters inner membrane component
qs_5_scaffold_144_21
unknown

Not on your lists

26581..26760
DNA (180bp) protein (60aa)

This feature has no annotations

qs_5_scaffold_144_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26855..27634)
DNA (780bp) protein (260aa)
3-oxoacyl-ACP reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4B4_9EURY
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:ELZ29502.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
short-chain dehydrogenase/reductase SDR
qs_5_scaffold_144_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27661..28563)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLK7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22769.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_5_scaffold_144_24
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(28571..30217)
DNA (1647bp) protein (549aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00035E6305
extracellular solute-binding protein family 1; K02027 multiple sugar transport system substrate-binding protein Tax=Caldatribacterium saccharofermentans
extracellular solute-binding protein
qs_5_scaffold_144_25
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30296..31450)
DNA (1155bp) protein (385aa)
Galactonate dehydratase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JVL2_9EURY
Galactonate dehydratase {ECO:0000313|EMBL:EMA13227.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
galactonate dehydratase
qs_5_scaffold_144_26
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31668..32432
DNA (765bp) protein (255aa)
Transcriptional regulator n=2 Tax=Haloarcula RepID=Q5V6V8_HALMA
kdgR1; transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AAV44744.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (st
qs_5_scaffold_144_27
unknown

Not on your lists

comp(32632..32868)
DNA (237bp) protein (79aa)

This feature has no annotations

qs_5_scaffold_144_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

33074..33220
DNA (147bp) protein (49aa)
Oxidoreductase domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DDF9_HALXS
oxidoreductase domain-containing protein
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:ELZ22383.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
qs_5_scaffold_144_29
unknown

Not on your lists

33368..33607
DNA (240bp) protein (80aa)

This feature has no annotations

qs_5_scaffold_144_30
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33779..34522)
DNA (744bp) protein (248aa)
Trehalose utilization protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLL8_9EURY
Trehalose utilization protein {ECO:0000313|EMBL:ELZ24170.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
trehalose utilization protein
Displaying items 1-30 of 52 in total

View Taxonomy