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qs_5_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 190 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_4_1
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..359)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1N8D4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG92980.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qs_5_scaffold_4_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(361..621)
DNA (261bp) protein (87aa)
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1MS51_9EURY
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:ERG92979.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="H
AbrB family transcription regulator
qs_5_scaffold_4_3
unknown

Not on your lists

935..2050
DNA (1116bp) protein (372aa)

This feature has no annotations

qs_5_scaffold_4_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2260..2772
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D0Z1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29105.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
CopG family protein
qs_5_scaffold_4_5
Yarrowia lipolytica, Yarrowia, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(2912..5134)
DNA (2223bp) protein (741aa)
YALI0B09867p n=1 Tax=Yarrowia lipolytica (strain CLIB 122 / E 150) RepID=Q6CF66_YARLI
YALI0B09867p {ECO:0000313|EMBL:CAG82940.1}; TaxID=284591 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia.;" source="Yarrow
hypothetical protein
qs_5_scaffold_4_6
unknown

Not on your lists

5628..6284
DNA (657bp) protein (219aa)

This feature has no annotations

qs_5_scaffold_4_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6333..6824)
DNA (492bp) protein (164aa)
Dual specificity protein phosphatase id=24649037 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Dual specificity phosphatase, catalytic domain protein {ECO:0000313|EMBL:ERH10172.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX6
phosphatase
qs_5_scaffold_4_8
unknown

Not on your lists

comp(6879..7388)
DNA (510bp) protein (170aa)

This feature has no annotations

qs_5_scaffold_4_9
unknown

Not on your lists

comp(7534..7893)
DNA (360bp) protein (120aa)

This feature has no annotations

qs_5_scaffold_4_10
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8159..8539
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZHD3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY85779.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
qs_5_scaffold_4_11
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9303..10022)
DNA (720bp) protein (240aa)
Site-specific DNA methylase protein {ECO:0000313|EMBL:ERJ07458.1}; EC=2.1.1.37 {ECO:0000313|EMBL:ERJ07458.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
Site-specific DNA methylase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PMP9_9EURY
qs_5_scaffold_4_12
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10138..11343)
DNA (1206bp) protein (402aa)
Cytosine-specific methyltransferase domain protein {ECO:0000313|EMBL:CDK38006.1}; EC=2.1.1.37 {ECO:0000313|EMBL:CDK38006.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales
Cytosine-specific methyltransferase domain protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DPC1_9EURY
hypothetical protein
qs_5_scaffold_4_13
unknown

Not on your lists

11516..11701
DNA (186bp) protein (62aa)

This feature has no annotations

qs_5_scaffold_4_14
unknown

Not on your lists

comp(11791..12126)
DNA (336bp) protein (112aa)

This feature has no annotations

qs_5_scaffold_4_15
unknown

Not on your lists

comp(12123..12668)
DNA (546bp) protein (182aa)

This feature has no annotations

qs_5_scaffold_4_16
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13006..14034
DNA (1029bp) protein (343aa)
Orc1-type DNA replication protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQA4_HALVD
orc12; Orc1-type DNA replication protein
Orc1-type DNA replication protein {ECO:0000313|EMBL:ADE02243.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (str
qs_5_scaffold_4_17
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14050..14739)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JRZ9_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB34019.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
qs_5_scaffold_4_18
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15012..15947
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YQY3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY75882.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
hypothetical protein
qs_5_scaffold_4_19
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15951..16256
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JM24_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA08740.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_5_scaffold_4_20
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16259..18409
DNA (2151bp) protein (717aa)
DNA polymerase I {ECO:0000313|EMBL:EMA11789.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EMA11789.1};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
DNA polymerase I n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JUY9_HALVA
polB2; DNA polymerase B2
qs_5_scaffold_4_21
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18485..18976)
DNA (492bp) protein (164aa)
Transcription factor n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PJQ8_9EURY
Transcription factor {ECO:0000313|EMBL:EMA70311.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
transcription factor
qs_5_scaffold_4_22
unknown

Not on your lists

comp(19004..19234)
DNA (231bp) protein (77aa)

This feature has no annotations

qs_5_scaffold_4_23
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19176..20477)
DNA (1302bp) protein (434aa)
XRE family transcriptional regulator protein {ECO:0000313|EMBL:CDK39492.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CDK39492.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
mcm; ATP-dependent DNA helicase MCM (intein-containing) (EC:3.6.4.12)
XRE family transcriptional regulator protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DTI6_9EURY
qs_5_scaffold_4_24
unknown

Not on your lists

comp(20611..21339)
DNA (729bp) protein (243aa)

This feature has no annotations

qs_5_scaffold_4_25
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21564..22832
DNA (1269bp) protein (423aa)
Integrase family protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C116_9EURY
Integrase family protein {ECO:0000313|EMBL:ELZ16961.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13
integrase family protein
qs_5_scaffold_4_26
unknown

Not on your lists

comp(22966..23223)
DNA (258bp) protein (86aa)

This feature has no annotations

qs_5_scaffold_4_27
unknown

Not on your lists

comp(23279..24052)
DNA (774bp) protein (258aa)

This feature has no annotations

qs_5_scaffold_4_28
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24194..25204)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NI54_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA57253.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
qs_5_scaffold_4_29
unknown

Not on your lists

comp(25201..25584)
DNA (384bp) protein (128aa)

This feature has no annotations

qs_5_scaffold_4_30
unknown

Not on your lists

comp(25577..25798)
DNA (222bp) protein (74aa)

This feature has no annotations

Displaying items 1-30 of 190 in total

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