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qs_5_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 81 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_13_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3..347)
DNA (345bp) protein (115aa)
ArsR family regulatory protein
ArsR family regulatory protein; K03892 ArsR family transcriptional regulator id=24658408 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Bacterial regulatory proteins, ArsR family {ECO:0000313|EMBL:ABC44368.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qs_5_scaffold_13_2
unknown

Not on your lists

1142..1237
DNA (96bp) protein (32aa)

This feature has no annotations

qs_5_scaffold_13_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

1582..1998
DNA (417bp) protein (139aa)
hypothetical protein Tax=CSP1_2_Dadabacteria
qs_5_scaffold_13_4
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2160..3293
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NNQ7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMR03345.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV
filamentation induced by cAMP protein Fic
qs_5_scaffold_13_trna_1
unknown

Not on your lists

comp(3676..3749)
DNA (74bp)
transferRNA
qs_5_scaffold_13_5
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3953..4819)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CQ32_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25356.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qs_5_scaffold_13_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5116..5796
DNA (681bp) protein (227aa)
nfi; endonuclease V; K05982 deoxyribonuclease V [EC:3.1.21.7] id=24658749 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801, ECO:0000313|EMBL:CBH25938.1}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801, ECO:0000313|EMBL:CBH25938.1};; Deoxyinosine 3'endonuclease {ECO:0000256|HAM
nfi; endonuclease V
qs_5_scaffold_13_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6576..8843
DNA (2268bp) protein (756aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
histidine kinase n=1 Tax=Salisaeta longa RepID=UPI0003B2EEE7
signal transduction histidine kinase, membrane
qs_5_scaffold_13_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8854..9471)
DNA (618bp) protein (206aa)
Carbon-nitrogen hydrolase n=2 Tax=Salinibacter ruber RepID=D5HAK4_SALRM
carbon-nitrogen hydrolase
Carbon-nitrogen hydrolase {ECO:0000313|EMBL:CBH25059.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qs_5_scaffold_13_9
unknown

Not on your lists

9484..9945
DNA (462bp) protein (154aa)

This feature has no annotations

qs_5_scaffold_13_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9807..10769)
DNA (963bp) protein (321aa)
Endonuclease/exonuclease/phosphatase family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7R2_SALRM
endonuclease/exonuclease/phosphatase family protein
Endonuclease/exonuclease/phosphatase family {ECO:0000313|EMBL:CBH24067.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sourc
qs_5_scaffold_13_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10989..13481)
DNA (2493bp) protein (831aa)
TonB-denpendent receptor n=1 Tax=Salisaeta longa RepID=UPI0003B74598
TonB-dependent receptor domain-containing protein
TonB-dependent receptor domain protein {ECO:0000313|EMBL:ABC43598.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qs_5_scaffold_13_12
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13703..14266)
DNA (564bp) protein (188aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
methionine sulfoxide reductase A n=1 Tax=Salisaeta longa RepID=UPI0003B61186
methionine sulfoxide reductase A
qs_5_scaffold_13_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14432..15583)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B370EA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45007.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_13_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15631..16254)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4G4_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44322.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_13_15
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

16386..16604
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036B43BC
hypothetical protein; K09165 hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
hypothetical protein
qs_5_scaffold_13_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16628..17449)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCS1_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47031.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_5_scaffold_13_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17553..19229)
DNA (1677bp) protein (559aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:ACY47032.1}; EC=3.4.21.102 {ECO:0000313|EMBL:ACY47032.1};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
Carboxyl-terminal protease n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCS2_RHOM4
carboxyl-terminal protease
qs_5_scaffold_13_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19349..20095)
DNA (747bp) protein (249aa)
tatC; Sec-independent protein translocase protein TatC
tatC; Sec-independent protein translocase protein TatC; K03118 sec-independent protein translocase protein TatC id=24657651 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
qs_5_scaffold_13_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20305..20922)
DNA (618bp) protein (206aa)
Phosphoribosyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE81_RHOMR
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ACY47034.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
qs_5_scaffold_13_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21158..22456)
DNA (1299bp) protein (433aa)
Serine hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000255|HAM
Serine hydroxymethyltransferase n=3 Tax=Salinibacter ruber RepID=GLYA_SALRD
glyA; Serine hydroxymethyltransferase
qs_5_scaffold_13_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22503..22889)
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Rhodothermus marinus RepID=D0MCS6_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47036.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_5_scaffold_13_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22997..23701)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4H1_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45498.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_13_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23941..24444)
DNA (504bp) protein (168aa)
FKBP-type peptidyl-prolyl cis-trans isomerase; K03774 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] id=24658152 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915, ECO:0000313|EMBL:CBH25355.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroide
fklB; peptidyl-prolyl cis-trans isomerase
qs_5_scaffold_13_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25244..26218
DNA (975bp) protein (325aa)
Ribonucleoside-diphosphate reductase beta subunit {ECO:0000313|EMBL:CBH23074.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBH23074.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
Ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4W9_SALRM
nrdB; ribonucleoside-diphosphate reductase subunit beta
qs_5_scaffold_13_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26275..27969
DNA (1695bp) protein (565aa)
Ribonucleoside-diphosphate reductase large chain {ECO:0000313|EMBL:CBH23075.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBH23075.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer
Ribonucleoside-diphosphate reductase large chain n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4X0_SALRM
nrdA; ribonucleoside-diphosphate reductase large chain
qs_5_scaffold_13_26
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(27884..28285)
DNA (402bp) protein (134aa)
Efflux pump membrane transporter BepE n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NII2_9BACT
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=CG_Ignavi_02
acriflavin resistance protein
qs_5_scaffold_13_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28282..28551)
DNA (270bp) protein (90aa)
Acriflavin resistance protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKM6_RHOMR
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:AEN73874.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;"
qs_5_scaffold_13_28
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28752..29750)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DYC3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK17157.1}; TaxID=1208320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolituus oleivorans R6-1
qs_5_scaffold_13_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30118..30699
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZI7_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45787.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying items 1-30 of 81 in total

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