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qs_5_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_17_1
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1..1035
DNA (1035bp) protein (345aa)
Hypothetical periplasmic protein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0KZI6_ZOBGA
hypothetical protein Tax=GWC2_Ignavibacteria_rel_36_12_curated
hypothetical protein
qs_5_scaffold_17_2
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2102..2581
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI0003697269
hypothetical protein Tax=CG_Delta_05
hypothetical protein
qs_5_scaffold_17_3
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2581..2805
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LA49_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKD36713.1}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;"
hypothetical protein
qs_5_scaffold_17_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

3204..3416
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SRQ5_9DELT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
qs_5_scaffold_17_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3413..3682
DNA (270bp) protein (90aa)
Plasmid stabilization system n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHP5_RHOMR
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:AEN73361.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_5_scaffold_17_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4050..4871)
DNA (822bp) protein (274aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJT5_RHOM4
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACY48743.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermu
qs_5_scaffold_17_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4958..6118)
DNA (1161bp) protein (387aa)
histidine kinase n=1 Tax=Salisaeta longa RepID=UPI0003B3BB82
two-component signal transduction histidine kinase
Two-component signal transduction histidine kinase {ECO:0000313|EMBL:CBH25471.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;
qs_5_scaffold_17_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6657..7955
DNA (1299bp) protein (433aa)
hemolysin D n=1 Tax=Salisaeta longa RepID=UPI0003B381E7
mdtA; multidrug transporter mdtA
Multidrug transporter mdtA {ECO:0000313|EMBL:CBH24289.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_5_scaffold_17_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8093..11236
DNA (3144bp) protein (1048aa)
Acriflavine resistance protein (Cation efflux system) n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3C4_SALRD
Acriflavine resistance protein (Cation efflux system) {ECO:0000313|EMBL:CBH24288.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacte
acrF; acriflavine resistance protein
qs_5_scaffold_17_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11539..13479
DNA (1941bp) protein (647aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI19_RHOM4
phosphoenolpyruvate-protein phosphotransferase
qs_5_scaffold_17_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13582..14022
DNA (441bp) protein (147aa)
hypothetical protein
hypothetical protein; K09117 hypothetical protein id=24659829 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
GatB/Yqey domain superfamily {ECO:0000313|EMBL:ABC46105.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_5_scaffold_17_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14105..14632
DNA (528bp) protein (176aa)
Colicin V production protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJF2_RHOM4
colicin V production protein
Colicin V production protein {ECO:0000313|EMBL:ACY48610.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_5_scaffold_17_13
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14987..18415
DNA (3429bp) protein (1143aa)
sensor proteinluxq (EC:2.7.3.-)
Sensor proteinLuxQ {ECO:0000313|EMBL:ABC78673.1}; EC=2.7.3.- {ECO:0000313|EMBL:ABC78673.1};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syn
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI000365FE20
qs_5_scaffold_17_14
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18581..20089)
DNA (1509bp) protein (503aa)
Pentapeptide repeat protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y654_9RHIZ
Pentapeptide repeat protein {ECO:0000313|EMBL:EMS42617.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobac
pentapeptide repeat-containing protein
qs_5_scaffold_17_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20408..23473
DNA (3066bp) protein (1022aa)
Exonuclease SbcC n=2 Tax=Salinibacter ruber RepID=D5HAE2_SALRM
exonuclease SbcC
Exonuclease SbcC, putative {ECO:0000313|EMBL:ABC45983.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_5_scaffold_17_16
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

23634..24362
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0W2_9CHLR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY47713.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubroba
qs_5_scaffold_17_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24456..26642)
DNA (2187bp) protein (729aa)
Methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:CBH24925.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CBH24925.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
methylmalonyl-CoA mutase n=1 Tax=Salisaeta longa RepID=UPI0003B5F57E
mutB; methylmalonyl-CoA mutase large subunit
qs_5_scaffold_17_18
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(26706..28565)
DNA (1860bp) protein (620aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ACF13318.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ACF13318.1};; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;"
methylmalonyl-CoA mutase n=1 Tax=Salisaeta longa RepID=UPI0003B39D05
qs_5_scaffold_17_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28562..29155)
DNA (594bp) protein (198aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SF39_RHOMR
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:AEN73260.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodot
qs_5_scaffold_17_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

29299..29967
DNA (669bp) protein (223aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
hypothetical protein id=24659750 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_5_scaffold_17_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30079..30780
DNA (702bp) protein (234aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SF40_RHOMR
Cytidylate kinase
qs_5_scaffold_17_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


31025..34303
DNA (3279bp) protein (1093aa)
Ribosomal protein S1, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1M7_SALRD
30S ribosomal protein S1
Ribosomal protein S1, putative {ECO:0000313|EMBL:ABC44287.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_5_scaffold_17_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34519..35667)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDF6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF06776.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
qs_5_scaffold_17_24
unknown

Not on your lists

comp(35817..36932)
DNA (1116bp) protein (372aa)

This feature has no annotations

qs_5_scaffold_17_25
unknown

Not on your lists

comp(37004..38167)
DNA (1164bp) protein (388aa)

This feature has no annotations

qs_5_scaffold_17_26
unknown

Not on your lists

comp(38348..38545)
DNA (198bp) protein (66aa)

This feature has no annotations

qs_5_scaffold_17_27
unknown

Not on your lists

comp(38794..39006)
DNA (213bp) protein (71aa)

This feature has no annotations

qs_5_scaffold_17_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(39043..40545)
DNA (1503bp) protein (501aa)
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1N2_SALRD
aldHT; Aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:CBH24915.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qs_5_scaffold_17_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

40757..42004
DNA (1248bp) protein (416aa)
Aminotransferase class I and II n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI86_RHOM4
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ACY48194.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qs_5_scaffold_17_30
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

42130..45243
DNA (3114bp) protein (1038aa)
TonB-dependent receptor n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JJ86_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:ELR68860.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
SusC/RagA family TonB-linked outer membrane protein
Displaying items 1-30 of 65 in total

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