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qs_5_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_18_1
unknown

Not on your lists

2..85
DNA (84bp) protein (28aa)

This feature has no annotations

qs_5_scaffold_18_2
unknown

Not on your lists

256..675
DNA (420bp) protein (140aa)

This feature has no annotations

qs_5_scaffold_18_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1145..2506
DNA (1362bp) protein (454aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit
NADH:ubiquinone oxidoreductase subunit H n=1 Tax=Salisaeta longa RepID=UPI0003B55BAD
nuoH; NADH dehydrogenase subunit H
qs_5_scaffold_18_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2626..3306
DNA (681bp) protein (227aa)
rpe; Ribulose-phosphate-3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] id=24656818 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:CBH22929.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes O
rpe; ribulose-phosphate 3-epimerase
qs_5_scaffold_18_5
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3585..4595
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034DCCB9
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:AHM61703.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" sou
beta-lactamase
qs_5_scaffold_18_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

4750..6033
DNA (1284bp) protein (428aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein MsalJ2_14671 id=3853562 bin=GWF2_Bacteroidetes_38_335 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
qs_5_scaffold_18_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6244..8520
DNA (2277bp) protein (759aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=761659 species="Bacteria; B
Primosomal protein N n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCX2_SALRM
priA; Primosomal protein N'
qs_5_scaffold_18_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8586..9548)
DNA (963bp) protein (321aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG97_RHOM4
diaminopimelate epimerase
qs_5_scaffold_18_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9629..11500)
DNA (1872bp) protein (624aa)
Dynamin family protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDN4_RHOM4
dynamin family protein
Dynamin family protein {ECO:0000313|EMBL:ACY47227.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marin
qs_5_scaffold_18_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11741..14782
DNA (3042bp) protein (1014aa)
beta-N-acetylhexosaminidase., beta-lactamase (EC:3.5.2.6 3.2.1.52)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
Beta-N-acetylhexosaminidase., Beta-lactamase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJI0_RHOMR
qs_5_scaffold_18_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14900..15220
DNA (321bp) protein (107aa)
FmdB family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B5D121
regulatory protein, FmdB family
Regulatory protein, FmdB family {ECO:0000313|EMBL:ACY47818.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qs_5_scaffold_18_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15490..16920)
DNA (1431bp) protein (477aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P) transhydrogenase subunit beta n=1 Tax=Salisaeta longa RepID=UPI0003B3F1BF
qs_5_scaffold_18_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17017..17337)
DNA (321bp) protein (107aa)
pntA; NAD(P) transhydrogenase subunit alpha; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] id=24658149 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
pntA; NAD(P) transhydrogenase subunit alpha
Uncharacterized protein {ECO:0000313|EMBL:ABC45542.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_18_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17372..18826)
DNA (1455bp) protein (485aa)
pntA; NAD(P) transhydrogenase subunit alpha; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] id=24658150 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
pntA; NAD(P) transhydrogenase subunit alpha
Alanine dehydrogenase/PNT, N-terminal domain family {ECO:0000313|EMBL:ABC46327.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
qs_5_scaffold_18_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18984..20126)
DNA (1143bp) protein (381aa)
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine
Phosphoserine aminotransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHB9_RHOMR
qs_5_scaffold_18_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20198..21400)
DNA (1203bp) protein (401aa)
phosphoglycerate dehydrogenase (EC:1.1.1.95)
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:AEN72636.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AEN72636.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
2-hydroxyacid dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B6409E
qs_5_scaffold_18_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21476..22708)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B302A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44818.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_18_trna_1
unknown

Not on your lists

22930..23002
DNA (73bp)
transferRNA
qs_5_scaffold_18_18
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23470..24123)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B38BAF
qs_5_scaffold_18_19
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24273..25301)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B650B6
qs_5_scaffold_18_20
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25459..26478)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B427C6
qs_5_scaffold_18_21
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26568..28235)
DNA (1668bp) protein (556aa)
gliding motility protein n=1 Tax=Salisaeta longa RepID=UPI0003B74994
gliding motility-associated lipoprotein GldK
Gliding motility-associated lipoprotein GldK {ECO:0000313|EMBL:AGA76901.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;"
qs_5_scaffold_18_22
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28369..29103)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B71632
qs_5_scaffold_18_23
unknown

Not on your lists

comp(29100..29810)
DNA (711bp) protein (237aa)

This feature has no annotations

qs_5_scaffold_18_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29835..31427)
DNA (1593bp) protein (531aa)
Mg chelatase, subunit ChlI n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIV2_RHOM4
Mg chelatase subunit ChlI
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:ACY48410.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus m
qs_5_scaffold_18_25
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(31557..33179)
DNA (1623bp) protein (541aa)
Acyltransferase WS/DGAT/MGAT family protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLS0_ROSCS
acyltransferase
Acyltransferase WS/DGAT/MGAT family protein {ECO:0000313|EMBL:ABU58468.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" sou
qs_5_scaffold_18_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33261..33827)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B7545F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24612.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_18_27
Halomonas sp. GFAJ-1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34028..34663
DNA (636bp) protein (212aa)
NLP/P60 protein n=1 Tax=Halomonas sp. GFAJ-1 RepID=H0J2A4_9GAMM
NLP/P60 protein {ECO:0000313|EMBL:EHK60926.1}; TaxID=1118153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. GFAJ-1.;"
NLP/P60
qs_5_scaffold_18_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

35005..35505
DNA (501bp) protein (167aa)
transcription elongation factor GreA n=1 Tax=Salisaeta longa RepID=UPI0003B7423B
greA; transcription elongation factor greA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=761659 species="Bacteria
qs_5_scaffold_18_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

35712..36383
DNA (672bp) protein (224aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|SAAS:SAAS00055690}; EC=2.4.-.- {ECO:0000256|SAAS:SAAS00279069};; EC=2.4.2.- {ECO:0000256|SAAS:SAAS00055699};; TaxID=762570 speci
peptidoglycan transglycosylase n=1 Tax=Salisaeta longa RepID=UPI0003B359A7
monofunctional biosynthetic peptidoglycan transglycosylase
Displaying items 1-30 of 70 in total

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