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qs_5_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 58 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_28_trna_2
unknown

Not on your lists

comp(840..925)
DNA (86bp)
transferRNA
qs_5_scaffold_28_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1216..2253
DNA (1038bp) protein (346aa)
Cytochrome oxidase assembly n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGG0_RHOMR
cytochrome oxidase assembly rbh
Cytochrome oxidase assembly {ECO:0000313|EMBL:AEN73656.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_5_scaffold_28_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2329..3261
DNA (933bp) protein (311aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154, ECO:0000313|EMBL:CBH25510.1}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154, ECO:0000313|EMBL:CBH25510.1};; Heme B farnesyltransferase
protoheme IX farnesyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B51174
cyoE; protoheme IX farnesyltransferase
qs_5_scaffold_28_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3324..4307
DNA (984bp) protein (328aa)
ABC transporter n=1 Tax=Salisaeta longa RepID=UPI0003B76DE5
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACY48672.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qs_5_scaffold_28_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4314..5195
DNA (882bp) protein (294aa)
ABC transporter n=1 Tax=Salisaeta longa RepID=UPI0003B4B0A1
ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_5_scaffold_28_5
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

5322..5903
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=RBG_16_Caldithrix_48_16_curated
Uncharacterized protein id=3748128 bin=GWF2_Ignavibacteria_35_20 species=gamma proteobacterium HIMB55 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
qs_5_scaffold_28_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5962..7050
DNA (1089bp) protein (363aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] id=24658067 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000255|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000255|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000255|HA
hypothetical protein
qs_5_scaffold_28_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7216..7467
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:CBH25270.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_28_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7589..9286
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJH9_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73851.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_5_scaffold_28_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9581..10363)
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HBH1_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25376.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_28_10
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10745..11887)
DNA (1143bp) protein (381aa)
Isoaspartyl aminopeptidase {ECO:0000313|EMBL:GAL70118.1}; EC=3.4.19.5 {ECO:0000313|EMBL:GAL70118.1};; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae
asparaginase n=1 Tax=Salisaeta longa RepID=UPI0003B682EF
asparaginase
qs_5_scaffold_28_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12301..12957
DNA (657bp) protein (219aa)
rpoE; RNA polymerase sigma-E factor
rpoE; RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658709 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-E factor {ECO:0000313|EMBL:CBH25894.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_5_scaffold_28_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13198..13539
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B539BD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25183.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_28_13
Dialister sp. CAG:486, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13564..16335)
DNA (2772bp) protein (924aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:486 RepID=R6AHG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA50425.1}; TaxID=1262870 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialist
hypothetical protein
qs_5_scaffold_28_14
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16486..17727)
DNA (1242bp) protein (414aa)
DNA repair exonuclease family protein YhaO n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJA9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEQ21772.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
metallophosphoesterase
qs_5_scaffold_28_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17854..20691)
DNA (2838bp) protein (946aa)
sensory box histidine kinase/response regulator (EC:2.7.3.-)
Sensory box histidine kinase/response regulator {ECO:0000313|EMBL:CBH22851.1}; EC=2.7.3.- {ECO:0000313|EMBL:CBH22851.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
Sensory box histidine kinase/response regulator n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CW22_SALRM
qs_5_scaffold_28_16
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20802..21608)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9X843_9CHRO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ28628.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
qs_5_scaffold_28_trna_1
unknown

Not on your lists

comp(21784..21856)
DNA (73bp)
transferRNA
qs_5_scaffold_28_17
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

22158..22895
DNA (738bp) protein (246aa)
ABC transporter ATP-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B56E87
ABC transporter; K05847 osmoprotectant transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ABC transporter ATP-binding protein
qs_5_scaffold_28_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22973..24550
DNA (1578bp) protein (526aa)
Transmembrane protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC58_SALRM
transmembrane protein
Transmembrane protein {ECO:0000313|EMBL:CBH25613.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qs_5_scaffold_28_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24676..26199
DNA (1524bp) protein (508aa)
carboxypeptidase; K01299 carboxypeptidase Taq [EC:3.4.17.19] id=24658430 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Carboxypeptidase {ECO:0000313|EMBL:ABC45252.1}; EC=3.4.17.19 {ECO:0000313|EMBL:ABC45252.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
carboxypeptidase
qs_5_scaffold_28_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26286..27707
DNA (1422bp) protein (474aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:CBH25626.1}; EC=2.5.1.54 {ECO:0000313|EMBL:CBH25626.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC71_SALRM
aroH; phospho-2-dehydro-3-deoxyheptonate aldolase
qs_5_scaffold_28_21
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

28002..30407
DNA (2406bp) protein (802aa)
Na-K-Cl cotransporter n=1 Tax=Salisaeta longa RepID=UPI0003B4162F
potE; Na-K-Cl cotransporter
Uncharacterized protein {ECO:0000313|EMBL:AKB23679.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
qs_5_scaffold_28_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30491..31081
DNA (591bp) protein (197aa)
hypothetical protein
hypothetical protein id=24658208 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44899.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_28_23
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31140..32258)
DNA (1119bp) protein (373aa)
membrane protein n=1 Tax=Salisaeta longa RepID=UPI0003B5AB1B
integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:ADW14842.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp
qs_5_scaffold_28_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32405..33931)
DNA (1527bp) protein (509aa)
Amidohydrolase family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYS6_SALRD
amidohydrolase family protein
Amidohydrolase family protein {ECO:0000313|EMBL:ABC45659.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_5_scaffold_28_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33991..35079)
DNA (1089bp) protein (363aa)
endoglucanase n=1 Tax=Salisaeta longa RepID=UPI0003B57440
endoglucanase
Endoglucanase, putative {ECO:0000313|EMBL:ABC45672.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_28_26
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(35355..36290)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NP35_MARHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB11623.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (st
qs_5_scaffold_28_27
unknown

Not on your lists

36435..37328
DNA (894bp) protein (298aa)

This feature has no annotations

qs_5_scaffold_28_28
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

37382..38086
DNA (705bp) protein (235aa)
fasciclin n=1 Tax=Salisaeta longa RepID=UPI0003B66944
secreted/surface protein with fasciclin-like repeats
Beta-Ig-H3/fasciclin {ECO:0000313|EMBL:AHM63137.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgacea
Displaying items 1-30 of 58 in total

View Taxonomy