ggKbase home page

qs_5_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 136 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_29_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..696)
DNA (696bp) protein (232aa)
hypothetical protein
hypothetical protein; K02014 iron complex outermembrane recepter protein id=24658045 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25248.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_29_2
unknown

Not on your lists

comp(812..1243)
DNA (432bp) protein (144aa)

This feature has no annotations

qs_5_scaffold_29_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1314..1994
DNA (681bp) protein (227aa)
Hydrolase, haloacid dehalogenase-like family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S225_SALRD
HAD superfamily hydrolase
Hydrolase, haloacid dehalogenase-like family {ECO:0000313|EMBL:ABC44189.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
qs_5_scaffold_29_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2057..2956)
DNA (900bp) protein (300aa)
phosphotransferase family protein
phosphotransferase family protein id=24657612 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphotransferase enzyme family, putative {ECO:0000313|EMBL:ABC43789.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qs_5_scaffold_29_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3107..3664)
DNA (558bp) protein (186aa)
Low molecular weight protein-tyrosine-phosphatase {ECO:0000313|EMBL:ABC45689.1}; EC=3.1.3.48 {ECO:0000313|EMBL:ABC45689.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
Low molecular weight protein-tyrosine-phosphatase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4K4_SALRD
low molecular weight protein-tyrosine-phosphatase
qs_5_scaffold_29_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3811..5040
DNA (1230bp) protein (410aa)
xseA; exodeoxyribonuclease VII large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] id=24657610 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Exodeoxyribonuclease 7 large subunit {ECO:0000255|HAMAP-Rule:MF_00378}; EC=3.1.11.6 {ECO:0000255|HAMAP-Rule:MF_00378};; Exodeoxyribonuclease VII large subunit {ECO:0000255|HAMAP-Rule:MF_00378}; Short=
xseA; exodeoxyribonuclease VII large subunit
qs_5_scaffold_29_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5281..6498
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B6E112
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23834.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_29_8
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6693..7964
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036C09A3
Possible AAA ATPase family protein {ECO:0000313|EMBL:EAW39009.1}; TaxID=313612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106
AAA ATPase central protein
qs_5_scaffold_29_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8161..8931)
DNA (771bp) protein (257aa)
Enoyl-CoA hydratase/isomerase n=2 Tax=Rhodothermus marinus RepID=D0MK90_RHOM4
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACY47003.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_5_scaffold_29_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9012..9938)
DNA (927bp) protein (309aa)
hypothetical protein
hypothetical protein id=24659107 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24268.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_29_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10091..10495)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8B2_SALRM
Uncharacterized protein {ECO:0000313|EMBL:CBH24267.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein
qs_5_scaffold_29_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10556..11353)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3E1_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44879.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_29_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11502..12857)
DNA (1356bp) protein (452aa)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MK71_RHOM4
pyrimidine-nucleoside phosphorylase
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:ACY46984.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodo
qs_5_scaffold_29_14
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12839..14611)
DNA (1773bp) protein (591aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037121A8
TonB-dependent receptor {ECO:0000313|EMBL:KEO75267.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
hypothetical protein
qs_5_scaffold_29_15
unknown

Not on your lists

comp(14823..15380)
DNA (558bp) protein (186aa)

This feature has no annotations

qs_5_scaffold_29_16
unknown

Not on your lists

comp(15996..16700)
DNA (705bp) protein (235aa)

This feature has no annotations

qs_5_scaffold_29_17
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(16826..17857)
DNA (1032bp) protein (344aa)
Abortive infection protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZU7_RUBXD
abortive infection protein
Tax=BJP_IG2158_Anaerolineales_38_74
qs_5_scaffold_29_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(17955..18176)
DNA (222bp) protein (74aa)
rpmE; 50S ribosomal protein L31
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 id=24659103 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L31 {ECO:0000255|HAMAP-Rule:MF_00501}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_5_scaffold_29_19
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18286..18855)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5AW80_BURRH
hypothetical protein Tax=CG_Delta_05
hypothetical protein
qs_5_scaffold_29_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19038..19169
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4P8_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45771.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_29_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19245..20003
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Y6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23791.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_29_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20168..21286
DNA (1119bp) protein (373aa)
DivIVA domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHC5_RHOMR
DivIVA domain-containing protein
DivIVA domain protein {ECO:0000313|EMBL:AEN72643.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinu
qs_5_scaffold_29_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21335..22147
DNA (813bp) protein (271aa)
purine nucleoside phosphorylase I, inosine and guanosine-specific (EC:2.4.2.1)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=762570 species="Bac
Purine nucleoside phosphorylase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHC6_RHOMR
qs_5_scaffold_29_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22294..25686
DNA (3393bp) protein (1131aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
Isoleucine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5Z8_SALRM
ileS; isoleucyl-tRNA synthetase
qs_5_scaffold_29_25
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25724..26257
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3B289
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ44560.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
qs_5_scaffold_29_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26324..26812
DNA (489bp) protein (163aa)
RNA polymerase-binding protein DksA n=1 Tax=Salisaeta longa RepID=UPI0003B4E35E
dksA; DnaK suppressor protein
DnaK suppressor protein {ECO:0000313|EMBL:CBH23454.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_29_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26904..27749
DNA (846bp) protein (282aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
Lipoprotein signal peptidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJZ7_RHOMR
lipoprotein signal peptidase
qs_5_scaffold_29_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27965..29845
DNA (1881bp) protein (627aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
GTP-binding protein LepA n=1 Tax=Salisaeta longa RepID=UPI0003B3591C
lepA; GTP-binding protein LepA
qs_5_scaffold_29_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29964..30788
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B44500
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48925.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_5_scaffold_29_30
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31101..32129
DNA (1029bp) protein (343aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
Signal peptidase I n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD12_RHOM4
signal peptidase I
Displaying items 1-30 of 136 in total

View Taxonomy