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qs_5_scaffold_1629

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_1629_1
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3..428)
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:ACM57746.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qs_5_scaffold_1629_2
marine actinobacterium MedAcidi-G1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(472..795)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA015-M09 RepID=UPI00002D9749
Uncharacterized protein {ECO:0000313|EMBL:KIE50635.1}; TaxID=1550399 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G1.;"
hypothetical protein
qs_5_scaffold_1629_3
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(842..1456)
DNA (615bp) protein (205aa)
cytochrome c oxidase subunit III; K02299 cytochrome o ubiquinol oxidase subunit III [EC:1.10.3.-] id=24489207 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
cytochrome c oxidase subunit III (EC:1.9.3.1)
Cytochrome oxidase subunit III {ECO:0000313|EMBL:KIE50180.1}; TaxID=1550401 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
qs_5_scaffold_1629_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(1487..2803)
DNA (1317bp) protein (439aa)
putative cytochrome c oxidase subunit I/subunit III (EC:1.9.3.1) Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
putative cytochrome c oxidase subunit I/subunit III (EC:1.9.3.1)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI000368CAE9
qs_5_scaffold_1629_5
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

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comp(2755..3381)
DNA (627bp) protein (209aa)
putative cytochrome c oxidase subunit I/subunit III (EC:1.9.3.1)
Putative cytochrome c oxidase subunit I/subunit III n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A735_9ACTN
Cytochrome C oxidase {ECO:0000313|EMBL:KIE50179.1}; TaxID=1550401 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
qs_5_scaffold_1629_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3444..4535)
DNA (1092bp) protein (364aa)
cytochrome c oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RBG_16_Actinobacteria_67_10_curated
cytochrome c oxidase subunit II (EC:1.9.3.1)
Cytochrome c oxidase subunit 2 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C449_SPHTD
qs_5_scaffold_1629_7
Gordonia sihwensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4808..5800
DNA (993bp) protein (331aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Gordonia sihwensis NBRC 108236 RepID=L7LLG2_9ACTO
deoxyuridine 5'-triphosphate nucleotidohydrolase
qs_5_scaffold_1629_trna_1
unknown

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5900..5972
DNA (73bp)
transferRNA
qs_5_scaffold_1629_8
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6003..8357)
DNA (2355bp) protein (785aa)
Cell wall-binding protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0FC96_DESDL
cell wall-binding protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
qs_5_scaffold_1629_9
unknown

Not on your lists

8628..8789
DNA (162bp) protein (54aa)

This feature has no annotations

qs_5_scaffold_1629_10
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9022..9591
DNA (570bp) protein (190aa)
Xanthine dehydrogenase accessory factor n=1 Tax=Microbacterium sp. TS-1 RepID=U2XN80_9MICO
Xanthine dehydrogenase accessory factor {ECO:0000313|EMBL:GAD34367.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. T
hypothetical protein
qs_5_scaffold_1629_11
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(9649..11091)
DNA (1443bp) protein (481aa)
amidase (EC:3.5.1.4)
Amidase {ECO:0000313|EMBL:ABA24123.1}; EC=3.5.1.4 {ECO:0000313|EMBL:ABA24123.1};; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strai
Amidase n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M4G3_ANAVT
qs_5_scaffold_1629_12
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11254..11712
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67QI0_SYMTH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD40063.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium th
qs_5_scaffold_1629_13
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

11785..13167
DNA (1383bp) protein (461aa)
tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfu
tRNA sulfurtransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASA9_RUBXD
thiamine biosynthesis protein
qs_5_scaffold_1629_14
unknown

Not on your lists

comp(13242..13793)
DNA (552bp) protein (184aa)

This feature has no annotations

qs_5_scaffold_1629_15
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(13825..14103)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2P4_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ38511.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
qs_5_scaffold_1629_16
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14090..15688)
DNA (1599bp) protein (533aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000313|EMBL:ABW09645.1}; EC=2.4.1.15 {ECO:0000313|EMBL:ABW09645.1};; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiacea
alpha,alpha-trehalose-phosphate synthase n=1 Tax=Nocardiopsis lucentensis RepID=UPI00034D040D
qs_5_scaffold_1629_17
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(15685..16380)
DNA (696bp) protein (232aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IER6_9CHLR
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EFO80315.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" sour
qs_5_scaffold_1629_18
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16409..16720)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Bergeyella zoohelcum RepID=K1LLE6_9FLAO
Transcriptional accessory protein {ECO:0000313|EMBL:KFF08680.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseo
uncharacterized protein
Displaying 19 items

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