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qs_5_scaffold_2049

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_2049_1
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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70..438
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=14631263 bin=bin9_gal15 species=Acidimicrobium ferrooxidans genus=Acidimicrobium taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=CSP1_3_Armatimonadetes
rplN; 50S ribosomal protein L14
qs_5_scaffold_2049_2

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439..777
DNA (339bp) protein (113aa)
Marine sediment metagenome DNA, contig: S03H2_L03098 {ECO:0000313|EMBL:GAH37602.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L24
50S ribosomal protein L24 id=4857433 bin=GWC2_Deltaproteobacteria_56_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
qs_5_scaffold_2049_3
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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791..1372
DNA (582bp) protein (194aa)
50S ribosomal protein L5 n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2Y4_ACIFD
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferro
50S ribosomal protein L5
qs_5_scaffold_2049_4
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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1469..1867
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y528_THEBD
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 1
qs_5_scaffold_2049_5
RBG_13_Firmicutes_65_8_curated, Firmicutes, Bacteria

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1895..2437
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2SUP9_9FIRM
ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_13_Firmicutes_65_8_curated
rplF; 50S ribosomal protein L6
qs_5_scaffold_2049_6
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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2493..2849
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=RL18_HERA2
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon au
qs_5_scaffold_2049_7
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2910..3488
DNA (579bp) protein (193aa)
30S ribosomal protein S5 n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1EAG2_9MICO
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Jan
30S ribosomal protein S5
qs_5_scaffold_2049_8
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

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3481..3852
DNA (372bp) protein (124aa)
50S ribosomal protein L30 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZP3_CLOSW
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_16_Actinobacteria_70_17_curated
50S ribosomal protein L30P
qs_5_scaffold_2049_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3849..4304
DNA (456bp) protein (152aa)
50S ribosomal protein L15 n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8TXH6_SULAD
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae S
qs_5_scaffold_2049_10
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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4344..5483
DNA (1140bp) protein (380aa)
preprotein translocase subunit SecY n=1 Tax=Rhodococcus rhodochrous RepID=UPI00037AAA54
secY; preprotein translocase secy
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=525370 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" sourc
Displaying 10 items

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