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qs_5_scaffold_505

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_505_1

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2..181
DNA (180bp) protein (60aa)
Transcription termination/antitermination protein NusG n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z0F0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KKN31745.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transcription antitermination protein nusG
qs_5_scaffold_505_2
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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239..637
DNA (399bp) protein (133aa)
50S ribosomal protein L11 n=1 Tax=Nocardiopsis gilva RepID=UPI0003486AFF
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" sour
qs_5_scaffold_505_3
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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728..1465
DNA (738bp) protein (246aa)
50S ribosomal protein L1 n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N3T0_9ACTO
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 1
qs_5_scaffold_505_4
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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1677..2279
DNA (603bp) protein (201aa)
50S ribosomal protein L10 n=1 Tax=Streptomyces vitaminophilus RepID=UPI000368D35E
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont
qs_5_scaffold_505_5
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2345..2731
DNA (387bp) protein (129aa)
50S ribosomal protein L7/L12 n=1 Tax=Nesterenkonia sp. F RepID=UPI000255C909
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
rplL; 50S ribosomal protein L7/L12
qs_5_scaffold_505_6
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3095..6697
DNA (3603bp) protein (1201aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
RpoB; DNA-directed RNA polymerase beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W1D8_9MICO
qs_5_scaffold_505_7
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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6783..10784
DNA (4002bp) protein (1334aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F3U6_MODMB
qs_5_scaffold_505_8
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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11090..11461
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=1 Tax=Streptomyces scabrisporus RepID=UPI0003674E8C
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (str
qs_5_scaffold_505_9
Lactobacillus hokkaidonensis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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11529..11999
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=2 Tax=Saccharomonospora azurea RepID=H8GFL8_9PSEU
rpsG; 30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1193095 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus hokkaidonens
qs_5_scaffold_505_10
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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12044..14191
DNA (2148bp) protein (716aa)
Elongation factor G n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=EFG_HALOH
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiace
translation elongation factor G
qs_5_scaffold_505_11
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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14297..15484
DNA (1188bp) protein (396aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=EFTU_ACIC1
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;"
Displaying 11 items

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