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qs_5_scaffold_423

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_423_1
Candidatus Saccharibacteria bacterium GW2011_GWA2_46_10, Candidatus Saccharibacteria, Bacteria

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139..2037
DNA (1899bp) protein (633aa)
Type II secretion system protein E {ECO:0000313|EMBL:KKU20364.1}; TaxID=1619069 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWA2_46_10.;"
Type II secretion system protein E
id=5226097 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
qs_5_scaffold_423_2
RHI_Saccharibacteria_41_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

2123..3334
DNA (1212bp) protein (404aa)
Type II secretion system protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PKF7_9BACT
Type II secretion system protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_41_12_curated
Type II secretion system protein
qs_5_scaffold_423_3
R_OP11_Levybacteria_40_58, Levybacteria, Microgenomates, Bacteria

Not on your lists

3411..3857
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037A71CB
putative general secretion pathway protein G; K02456 general secretion pathway protein G Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_58_curated
secretion system protein G
qs_5_scaffold_423_4
RHI_Saccharibacteria_47_16b, Candidatus Saccharibacteria, Bacteria

Not on your lists

3933..4319
DNA (387bp) protein (129aa)
id=24444260 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_16b_curated
qs_5_scaffold_423_5
unknown

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4316..4969
DNA (654bp) protein (218aa)

This feature has no annotations

qs_5_scaffold_423_6
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

4981..6372
DNA (1392bp) protein (464aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
qs_5_scaffold_423_7
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

6415..7473
DNA (1059bp) protein (353aa)
Cell division protein FtsA Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
Cell division protein FtsA id=2849823 bin=GWC1_CPR2_39_9 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Cell division protein FtsA
qs_5_scaffold_423_8
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

7470..8120
DNA (651bp) protein (217aa)
id=2849824 bin=GWC1_CPR2_39_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Tax=GWC2_CPR2_39_10
qs_5_scaffold_423_9
unknown

Not on your lists

8117..8674
DNA (558bp) protein (186aa)

This feature has no annotations

qs_5_scaffold_423_10
unknown

Not on your lists

8671..8964
DNA (294bp) protein (98aa)

This feature has no annotations

qs_5_scaffold_423_11
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(9001..9552)
DNA (552bp) protein (184aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
Uncharacterized protein id=1263752 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
qs_5_scaffold_423_12
GWA1_OP11_41_13, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(9581..10600)
DNA (1020bp) protein (340aa)
ruvB; Holliday junction DNA helicase, ATP-dependent component (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB Tax=GWA1_OP11_41_13
Holliday junction ATP-dependent DNA helicase RuvB id=2444198 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
qs_5_scaffold_423_13
RHI_Saccharibacteria_49_19, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(10683..11246)
DNA (564bp) protein (188aa)
ruvA; Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_49_19_curated
Holliday junction DNA helicase, subunit A id=3887241 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
ATP-dependent DNA helicase RuvA
qs_5_scaffold_423_14
GWA1_OP11_41_13, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(11258..11725)
DNA (468bp) protein (156aa)
Crossover junction endodeoxyribonuclease RuvC Tax=GWA1_OP11_41_13
Crossover junction endodeoxyribonuclease RuvC id=2444216 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Crossover junction endodeoxyribonuclease RuvC
qs_5_scaffold_423_15
RHI_Saccharibacteria_41_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11726..12454)
DNA (729bp) protein (243aa)
transcriptional regulator n=1 Tax=Synergistetes bacterium JGI 0000079-D21 RepID=UPI0003B3F103
putative transcriptional regulatory protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_41_12_curated
hypothetical protein
qs_5_scaffold_423_16
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(12490..13956)
DNA (1467bp) protein (489aa)
membrane protein of unknown function Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
hypothetical protein
hypothetical protein cdivTM_06999, partial id=2444366 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
qs_5_scaffold_423_17
RIFOXYC2_FULL_OD1_Uhrbacteria_47_19_curated, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists


comp(13997..15394)
DNA (1398bp) protein (466aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RIFOXYC2_FULL_OD1_Uhrbacteria_47_19_curated
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartyl-tRNA synthetase id=3544693 bin=GWC1_OD1_38_17 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Displaying 17 items

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