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qs_5_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 59 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_47_trna_1
unknown

Not on your lists

554..640
DNA (87bp)
transferRNA
qs_5_scaffold_47_1
RLO_RIF_OD1_05_38_22, RIF-OD1-5, Parcubacteria, Bacteria

Not on your lists

842..1282
DNA (441bp) protein (147aa)
2'-5' RNA ligase n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IX38_NOSP7
2'-5' RNA ligase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_05_38_22_curated
2'-5' RNA ligase
qs_5_scaffold_47_2
R_OD1_Uhrbacteria_57_19, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

1361..2137
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000368A080
methyltransferase type 11 Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_57_19_curated
putative methyltransferase type 11
qs_5_scaffold_47_3

Not on your lists

2173..2640
DNA (468bp) protein (156aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=uncultured bacterium RepID=K2E9G7_9BACT
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:EKE06157.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
YbaK/prolyl-tRNA synthetase associated domain-containing protein
qs_5_scaffold_47_4
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2663..3382
DNA (720bp) protein (240aa)
LmbE-like protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KBP2_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00585.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
qs_5_scaffold_47_5
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

3797..4150
DNA (354bp) protein (118aa)
Sulfurtransferase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HTA8_9GAMM
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:KKU72772.1}; TaxID=1618844 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_26.;"
rhodanese-like domain-containing protein
qs_5_scaffold_47_6
unknown

Not on your lists

comp(5280..5483)
DNA (204bp) protein (68aa)

This feature has no annotations

qs_5_scaffold_47_7
unknown

Not on your lists

comp(5610..6095)
DNA (486bp) protein (162aa)

This feature has no annotations

qs_5_scaffold_47_8
R_OD1_Kaiserbacteria_54_22, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

6237..7178
DNA (942bp) protein (314aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_22_curated
qs_5_scaffold_47_9
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7207..8226
DNA (1020bp) protein (340aa)
UPI0003D6625B related cluster n=1 Tax=unknown RepID=UPI0003D6625B
Membrane protein {ECO:0000313|EMBL:ETI60229.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;
hypothetical protein
qs_5_scaffold_47_10
RHI_Saccharibacteria_42_8, Candidatus Saccharibacteria, Bacteria

Not on your lists

8265..10019
DNA (1755bp) protein (585aa)
dnaG; DNA primase Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_42_8_curated
DNA primase id=4789669 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
dnaG; DNA primase
qs_5_scaffold_47_11
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

10037..11116
DNA (1080bp) protein (360aa)
sigA; RNA polymerase major sigma-43 factor (sigma-A) Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
RNA polymerase sigma factor id=2740041 bin=GWC1_TM7_41_48 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC1_TM7_41_48 organism_group=TM7
RNA polymerase sigma factor RpoD
qs_5_scaffold_47_12
Mobiluncus mulieris, Mobiluncus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11211..12266
DNA (1056bp) protein (352aa)
RNA polymerase sigma factor SigA n=1 Tax=Mobiluncus mulieris FB024-16 RepID=E1ME48_9ACTO
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=866770 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus mulieris FB024-1
RNA polymerase sigma factor
qs_5_scaffold_47_13
RHI_Saccharibacteria_47_16b, Candidatus Saccharibacteria, Bacteria

Not on your lists

12718..15279
DNA (2562bp) protein (854aa)
polA; DNA polymerase I (EC:2.7.7.7) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_16b_curated
hypothetical protein
DNA polymerase I, partial id=4041687 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
qs_5_scaffold_47_14
GWA1_OP11_39_11, Levybacteria, Microgenomates, Bacteria

Not on your lists

15328..15765
DNA (438bp) protein (146aa)
dihydroneopterin aldolase n=1 Tax=Marinococcus halotolerans RepID=UPI0003B57795
Putative disulfide formation protein {ECO:0000313|EMBL:KKQ95307.1}; TaxID=1618453 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA1_39_11.;"
bdbC; thiol-disulfide oxdoreductase BdbC
qs_5_scaffold_47_15
RHI_Saccharibacteria_49_19, Candidatus Saccharibacteria, Bacteria

Not on your lists

16334..16900
DNA (567bp) protein (189aa)
Resuscitation-promoting factor n=1 Tax=Arthrobacter nicotianae RepID=Q306K2_ARTNC
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_49_19_curated
hypothetical protein
qs_5_scaffold_47_16
RHI_Saccharibacteria_47_16b, Candidatus Saccharibacteria, Bacteria

Not on your lists

17278..18225
DNA (948bp) protein (316aa)
mutM; formamidopyrimidine-DNA glycosidase (EC:3.2.2.23 4.2.99.18) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_16b_curated
Formamidopyrimidine-DNA glycosylase n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RXB5_9BACT
hypothetical protein
qs_5_scaffold_47_17
unknown

Not on your lists

comp(18257..18748)
DNA (492bp) protein (164aa)

This feature has no annotations

qs_5_scaffold_47_18
unknown

Not on your lists

19007..19630
DNA (624bp) protein (208aa)

This feature has no annotations

qs_5_scaffold_47_19

Not on your lists

comp(19734..20189)
DNA (456bp) protein (152aa)
Metal dependent phosphohydrolase n=1 Tax=uncultured bacterium RepID=K2FCI2_9BACT
HD domain protein {ECO:0000313|EMBL:AIA18751.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
metal dependent phosphohydrolase
qs_5_scaffold_47_20
RHI_Saccharibacteria_47_16b, Candidatus Saccharibacteria, Bacteria

Not on your lists

20437..21369
DNA (933bp) protein (311aa)
DNA polymerase III, delta subunit (EC:2.7.7.7) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_16b_curated
DNA polymerase III, delta subunit id=1263567 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
DNA polymerase III subunit delta
qs_5_scaffold_47_21
unknown

Not on your lists

21702..21869
DNA (168bp) protein (56aa)

This feature has no annotations

qs_5_scaffold_47_22
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(21818..22168)
DNA (351bp) protein (117aa)
30S ribosomal protein S20 n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0CY86_9BACL
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidote
30S ribosomal protein S20
qs_5_scaffold_47_23
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

22355..24313
DNA (1959bp) protein (653aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
hypothetical protein
id=5226331 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
qs_5_scaffold_47_24
RHI_Saccharibacteria_49_19, Candidatus Saccharibacteria, Bacteria

Not on your lists

24479..25252
DNA (774bp) protein (258aa)
truB; tRNA pseudouridine synthase B (EC:5.4.99.25) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_49_19_curated
tRNA pseudouridine synthase B
tRNA pseudouridine synthase B id=5226332 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
qs_5_scaffold_47_25
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


25558..25824
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R3M2_BIFAB
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1402194 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" s
qs_5_scaffold_47_26
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

26114..28240
DNA (2127bp) protein (709aa)
putative polynucleotide phosphorylase (PNPase) (EC:2.7.7.8 3.1.13.1) Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase id=2739901 bin=GWC1_TM7_41_48 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_TM7_41_48 organism_group=TM7
qs_5_scaffold_47_27
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

28304..28663
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Lyngbya majuscula 3L RepID=F4XUY0_9CYAN id=89300 bin=ACD5 species=Moorea producens genus=Moorea taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
hypothetical protein
qs_5_scaffold_47_28
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

28706..29296
DNA (591bp) protein (197aa)
Phage SPO1 DNA polymerase-related protein Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
Phage SPO1 DNA polymerase-related protein
Phage SPO1 DNA polymerase-related protein id=5226337 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
qs_5_scaffold_47_29
RHI_Saccharibacteria_49_19, Candidatus Saccharibacteria, Bacteria

Not on your lists

29407..31440
DNA (2034bp) protein (678aa)
Beta-lactamase domain protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_49_19_curated
Beta-lactamase protein
id=5226338 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Displaying items 1-30 of 59 in total

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