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qs_5_scaffold_72

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Displaying items 1-30 of 93 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_72_1
RHI_Saccharibacteria_49_19, Candidatus Saccharibacteria, Bacteria

Not on your lists

141..1592
DNA (1452bp) protein (484aa)
tig; Trigger factor (EC:5.2.1.8) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_49_19_curated
Trigger factor id=2604232 bin=GWC1_CPR2_39_9 species=Ruminococcus sp. SR1/5 genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
hypothetical protein
qs_5_scaffold_72_2
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists

1630..2238
DNA (609bp) protein (203aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=uncultured bacterium RepID=K1XDG9_9BACT
qs_5_scaffold_72_3
Parcubacteria bacterium GW2011_GWA2_52_8, Parcubacteria, Bacteria

Not on your lists

2556..3092
DNA (537bp) protein (179aa)
Putative Transposase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8T1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKW29763.1}; TaxID=1618857 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_52_8.;"
putative transposase
qs_5_scaffold_72_4
RHI_Saccharibacteria_49_19, Candidatus Saccharibacteria, Bacteria

Not on your lists

3291..6815
DNA (3525bp) protein (1175aa)
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_49_19_curated
sti:Sthe_1029 DNA-directed RNA polymerase, beta subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=3239598 bin=GWC1_TM7_41_48 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_TM7_41_48 organism_group=TM7
DNA-directed RNA polymerase subunit beta
qs_5_scaffold_72_5
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists

6818..10627
DNA (3810bp) protein (1270aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibac
DNA-directed RNA polymerase subunit beta n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RW86_9BACT
DNA-directed RNA polymerase subunit beta'
qs_5_scaffold_72_6
RHI_Saccharibacteria_47_16b, Candidatus Saccharibacteria, Bacteria

Not on your lists


10790..11197
DNA (408bp) protein (136aa)
rpsL; ribosomal protein S12 (BS12) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_16b_curated
30S ribosomal protein S12 id=2441371 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
30S ribosomal protein S12
qs_5_scaffold_72_7
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists


11201..11677
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RVY7_9BACT
hypothetical protein
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
qs_5_scaffold_72_8
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

11804..13873
DNA (2070bp) protein (690aa)
Elongation factor G id=2597256 bin=GWC1_CPR2_39_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
fusA2; elongation factor G Tax=CG_CPR17-01
fusA; Elongation factor G
qs_5_scaffold_72_9
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

14068..15252
DNA (1185bp) protein (395aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Piscirickettsia salmonis LF-89 = ATCC VR-1361 RepID=U4TMI7_PISSA
tufA; elongation factor Tu Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
qs_5_scaffold_72_10
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists


15328..15645
DNA (318bp) protein (106aa)
30S ribosomal protein S10 n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=RS10_NATTJ
rpsJ; ribosomal protein S10 (BS13) Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
30S ribosomal protein S10
qs_5_scaffold_72_11
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15759..16214
DNA (456bp) protein (152aa)
NTP pyrophosphohydrolase n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GTD2_9CYAN
NTP pyrophosphohydrolase {ECO:0000313|EMBL:EKQ70969.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
putative hydrolase
qs_5_scaffold_72_12
RHI_Saccharibacteria_42_8, Candidatus Saccharibacteria, Bacteria

Not on your lists

16270..16527
DNA (258bp) protein (86aa)
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_42_8_curated
qs_5_scaffold_72_13
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16524..18257
DNA (1734bp) protein (578aa)
Membrane protein {ECO:0000313|EMBL:AJR18238.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).
membrane protein id=2641784 bin=GWC2_TM7_48_9 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
membrane protein
qs_5_scaffold_72_14
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists


18417..19019
DNA (603bp) protein (201aa)
50S ribosomal protein L3
50S ribosomal protein L3 id=5226696 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
qs_5_scaffold_72_15
RHI_Saccharibacteria_49_19, Candidatus Saccharibacteria, Bacteria

Not on your lists


19019..19657
DNA (639bp) protein (213aa)
50S ribosomal protein L4 n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRQ2_9BACT
rplD; 50S ribosomal protein L4 Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_49_19_curated
50S ribosomal protein L4
qs_5_scaffold_72_16
Avibacterium paragallinarum, Avibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19654..19947
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Avibacterium paragallinarum JF4211 RepID=S6EQ96_AVIPA
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1351754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aviba
50S ribosomal protein L23
qs_5_scaffold_72_17
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists


19947..20777
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=RL2_HERA2
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aur
qs_5_scaffold_72_18
unknown

Not on your lists

20779..20901
DNA (123bp) protein (41aa)

This feature has no annotations

qs_5_scaffold_72_19
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists


20898..21173
DNA (276bp) protein (92aa)
rpsS; ribosomal protein S19 (BS19) Tax=CG_CPR12_01
Ribosomal protein S19 id=2441113 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpsS; ribosomal protein S19 (BS19)
qs_5_scaffold_72_20
RHI_Saccharibacteria_47_16b, Candidatus Saccharibacteria, Bacteria

Not on your lists


21173..21529
DNA (357bp) protein (119aa)
50S ribosomal protein L22 n=1 Tax=uncultured bacterium RepID=K1YZG7_9BACT
rplV; 50S ribosomal protein L22 Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_16b_curated
ribosomal protein L22
qs_5_scaffold_72_21
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists


21519..22145
DNA (627bp) protein (209aa)
30S ribosomal protein S3 n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRQ7_9BACT
rpsC; ribosomal protein S3 (BS3) Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
30S ribosomal protein S3
qs_5_scaffold_72_22
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists


22149..22577
DNA (429bp) protein (143aa)
50S ribosomal protein L16
50S ribosomal protein L16 id=5226689 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacteriu
qs_5_scaffold_72_23
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


22574..22762
DNA (189bp) protein (63aa)
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Calda
qs_5_scaffold_72_24
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists


22762..23010
DNA (249bp) protein (83aa)
30S ribosomal protein S17 n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AA46_THEID
30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae;
qs_5_scaffold_72_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


23007..23375
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=2 Tax=Collinsella RepID=A4E9K5_9ACTN
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collin
rplN; 50S ribosomal protein L14
qs_5_scaffold_72_26
Candidatus Saccharibacteria bacterium GW2011_GWA2_46_10, Candidatus Saccharibacteria, Bacteria

Not on your lists


23372..23692
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=1 Tax=Firmicutes bacterium CAG:449 RepID=R6QXQ2_9FIRM
50S ribosomal protein L24 {ECO:0000313|EMBL:KKU19765.1}; TaxID=1619069 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWA2_46_10.;"
50S ribosomal protein L24
qs_5_scaffold_72_27
Candidatus Saccharibacteria bacterium GW2011_GWA2_46_10, Candidatus Saccharibacteria, Bacteria

Not on your lists


23689..24237
DNA (549bp) protein (183aa)
50S ribosomal protein L5 {ECO:0000313|EMBL:KKU19766.1}; TaxID=1619069 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWA2_46_10.;"
50S ribosomal protein L5 id=2394489 bin=GWD1_TM7_39_7 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
50S ribosomal protein L5
qs_5_scaffold_72_28
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


24415..24801
DNA (387bp) protein (129aa)
30S ribosomal protein S8 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3N8_ANATU
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=CG_Anaero_01
rpsH; 30S ribosomal protein S8
qs_5_scaffold_72_29
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


24911..25453
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YWP4_DESAF
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae;
TM7 Jill Banfield (10/29/14)
qs_5_scaffold_72_30
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists


25450..25779
DNA (330bp) protein (110aa)
50S ribosomal protein L18 n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U9G9_OCEP5
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (s
Displaying items 1-30 of 93 in total

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