ggKbase home page

qs_5_scaffold_275

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_275_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..556)
DNA (555bp) protein (185aa)
Ribonucleotide reductase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P543_HALMD
ribonucleotide reductase
Ribonucleotide reductase {ECO:0000313|EMBL:ACV49438.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_5_scaffold_275_2
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(690..1028)
DNA (339bp) protein (113aa)
Transcriptional repressor NrdR n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FSI5_9EURY
nrdR; NrdR family transcriptional regulator
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochsteni
qs_5_scaffold_275_3

Not on your lists

comp(1753..3312)
DNA (1560bp) protein (520aa)
5'-Nucleotidase domain-containing protein n=1 Tax=halophilic archaeon DL31 RepID=G2MM37_9ARCH
5'-nucleotidase
5'-Nucleotidase domain-containing protein {ECO:0000313|EMBL:AEN05864.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_5_scaffold_275_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3775..5799
DNA (2025bp) protein (675aa)
Bacterio-opsin activator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D066_9EURY
Bacterio-opsin activator {ECO:0000313|EMBL:ELZ28901.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2
bat; receiver/sensor/bat box HTH-10 family transcription regulator Bat (homolog to bacterioopsin activator)
qs_5_scaffold_275_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5999..6703
DNA (705bp) protein (235aa)
Bacteriorhodopsin n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2I2_9EURY
Bacteriorhodopsin {ECO:0000313|EMBL:ELZ28902.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
rhodopsin
qs_5_scaffold_275_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6857..7636
DNA (780bp) protein (260aa)
crtY; lycopene cyclase (EC:1.14.-.-)
Lycopene cyclase domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D218_9EURY
Lycopene cyclase domain-containing protein {ECO:0000313|EMBL:ELZ28903.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimp
qs_5_scaffold_275_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7668..8702
DNA (1035bp) protein (345aa)
Brp-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D420_9EURY
Brp-like protein {ECO:0000313|EMBL:ELZ28904.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
blh; brp-like protein
qs_5_scaffold_275_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8787..9476
DNA (690bp) protein (230aa)
atpD; V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0B5_9EURY
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qs_5_scaffold_275_9
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9577..10035)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E4M1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDS91842.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
qs_5_scaffold_275_10
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10261..10476)
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:ACV11967.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
qs_5_scaffold_275_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10758..11705
DNA (948bp) protein (316aa)
Halocyanin-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CTP7_9EURY
Halocyanin-like protein {ECO:0000313|EMBL:ELZ25792.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hcpB; halocyanin hcpB
qs_5_scaffold_275_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11816..12208
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D071_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28906.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_5_scaffold_275_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12540..13778)
DNA (1239bp) protein (413aa)
Peptide chain release factor subunit 1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2I7_9EURY
Peptide chain release factor subunit 1 {ECO:0000256|HAMAP-Rule:MF_00424}; Translation termination factor aRF1 {ECO:0000256|HAMAP-Rule:MF_00424}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacte
peptide chain release factor eRF/aRF subunit 1
qs_5_scaffold_275_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13904..14710
DNA (807bp) protein (269aa)
Septum site-determining protein MinD n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D426_9EURY
Septum site-determining protein MinD {ECO:0000313|EMBL:ELZ28909.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex ca
septum formation initiator
qs_5_scaffold_275_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


14840..16585
DNA (1746bp) protein (582aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=797114 species="Archaea; Eurya
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D076_9EURY
qs_5_scaffold_275_16
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16746..17684
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VVL9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN01240.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qs_5_scaffold_275_17
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17684..18706
DNA (1023bp) protein (341aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W977_9EURY
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AGN01239.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harc
qs_5_scaffold_275_18
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18745..19401
DNA (657bp) protein (219aa)
short-chain dehydrogenase/reductase SDR id=24656044 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Dehydrogenase {ECO:0000313|EMBL:ERG89389.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
short-chain dehydrogenase/reductase SDR
qs_5_scaffold_275_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19627..19893)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWX9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27710.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_5_scaffold_275_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20048..21031)
DNA (984bp) protein (328aa)
Aryl-alcohol dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYJ6_9EURY
Aryl-alcohol dehydrogenase {ECO:0000313|EMBL:ELZ27713.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
qs_5_scaffold_275_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21195..23006
DNA (1812bp) protein (604aa)
UvrABC system protein C n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0N3_9EURY
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=797114 species="Ar
uvrC; excinuclease ABC subunit C
qs_5_scaffold_275_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23312..24544)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT10_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25803.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_5_scaffold_275_23
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24666..25034)
DNA (369bp) protein (123aa)
Na(+):H(+) antiporter n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0IW30_9EURY
Na(+):H(+) antiporter {ECO:0000313|EMBL:EMA00268.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 35960.
Na(+):H(+) antiporter
Displaying 23 items

View Taxonomy