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qs_5_scaffold_471

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_471_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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283..1788
DNA (1506bp) protein (502aa)
Replication factor A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYC1_9EURY
Replication factor A {ECO:0000313|EMBL:ELZ27618.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
rpa; replication factor A
qs_5_scaffold_471_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1908..2342
DNA (435bp) protein (145aa)
Transcription factor CBF/NF-Y/histone domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYW7_9EURY
Transcription factor CBF/NF-Y/histone domain protein {ECO:0000313|EMBL:ELZ27617.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source
hstA; archaeal histone
qs_5_scaffold_471_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2342..3469
DNA (1128bp) protein (376aa)
Histone deacetylase superfamily protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWK8_9EURY
Histone deacetylase superfamily protein {ECO:0000313|EMBL:ELZ27616.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
aup; acetoin utilization protein
qs_5_scaffold_471_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3548..4966)
DNA (1419bp) protein (473aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0F0_9EURY
qs_5_scaffold_471_trna_1
unknown

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5057..5158
DNA (102bp)
transferRNA
qs_5_scaffold_471_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5175..5567)
DNA (393bp) protein (131aa)
Putative heat shock protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWU0_9EURY
Putative heat shock protein {ECO:0000313|EMBL:ELZ27701.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadens
heat shock protein Hsp20
qs_5_scaffold_471_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5721..6998
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUB0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26835.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_5_scaffold_471_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7108..7863
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUD0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26836.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_5_scaffold_471_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8006..9004)
DNA (999bp) protein (333aa)
GTP-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWK7_9EURY
GTP-binding protein {ECO:0000313|EMBL:ELZ26837.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
GTP-binding protein HSR1-related
qs_5_scaffold_471_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9106..11598)
DNA (2493bp) protein (831aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KDU5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA00821.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_5_scaffold_471_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12364..12981
DNA (618bp) protein (206aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobact
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4F2_9EURY
hypothetical protein
qs_5_scaffold_471_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13033..14478)
DNA (1446bp) protein (482aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCY6_9EURY
qs_5_scaffold_471_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15069..16886)
DNA (1818bp) protein (606aa)
beta-1,4-xylanase, family GH10 (EC:3.2.1.8)
Putative glycoside hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNI3_9EURY
Putative glycoside hydrolase {ECO:0000313|EMBL:ELZ24188.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
qs_5_scaffold_471_13
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17719..18195)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NA00_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG93650.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qs_5_scaffold_471_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18199..18732)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N416_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52288.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
transcriptional regulator
qs_5_scaffold_471_15
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18829..19443)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V386_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF27173.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_5_scaffold_471_16

Not on your lists

comp(19625..20053)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4XNM3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS10064.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
conserved hypothetical protein (DUF86)
qs_5_scaffold_471_17
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20046..20477)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DE45_9EURY
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:CQR52601.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-
DNA polymerase beta domain protein region
qs_5_scaffold_471_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(20923..22344)
DNA (1422bp) protein (474aa)
Sulfatase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P068_HALMD
sulfatase
Sulfatase {ECO:0000313|EMBL:ACV48860.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain ATCC 7
qs_5_scaffold_471_19
unknown

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comp(22669..23142)
DNA (474bp) protein (158aa)

This feature has no annotations

qs_5_scaffold_471_20

Not on your lists

comp(23190..23897)
DNA (708bp) protein (236aa)
IS630-type transposase ISHwa7 n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LMM3_HALWC
Marine sediment metagenome DNA, contig: S01H1_S24056 {ECO:0000313|EMBL:GAG14143.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
IS630-type transposase ISHwa7
qs_5_scaffold_471_21
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24067..24417
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Halobacteriaceae RepID=B9LVZ2_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58382.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qs_5_scaffold_471_trna_2
unknown

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comp(24399..24473)
DNA (75bp)
transferRNA
qs_5_scaffold_471_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


24757..26145
DNA (1389bp) protein (463aa)
Signal recognition particle 54 kDa protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY84_9EURY
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
GTP-binding signal recognition particle SRP54 G-domain-containing protein
qs_5_scaffold_471_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26806..27876
DNA (1071bp) protein (357aa)
Mannonate dehydratase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CB46_9EURY
Mannonate dehydratase {ECO:0000313|EMBL:ELZ19863.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
mannonate dehydratase
qs_5_scaffold_471_24
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27797..28636)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0IFP4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ95566.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717
hypothetical protein
qs_5_scaffold_471_25
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28789..28989)
DNA (201bp) protein (67aa)
Transcriptional regulator, IclR family n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DDB5_HALXS
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEH39004.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensi
Displaying 27 items

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