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qs_5_scaffold_1064

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_1064_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..543)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M6Z4_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA40389.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_5_scaffold_1064_2
unknown

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comp(665..877)
DNA (213bp) protein (71aa)

This feature has no annotations

qs_5_scaffold_1064_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1094..2539)
DNA (1446bp) protein (482aa)
Type III restriction protein res subunit n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M702_9EURY
Type III restriction protein res subunit {ECO:0000313|EMBL:EMA41582.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
helicase
qs_5_scaffold_1064_4
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2695..3534
DNA (840bp) protein (280aa)
Protein GrpE n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BF32_9EURY
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrige
molecular chaperone GrpE (heat shock protein)
qs_5_scaffold_1064_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3539..3901
DNA (363bp) protein (121aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N212_9EURY
qs_5_scaffold_1064_6
unknown

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comp(4034..4228)
DNA (195bp) protein (65aa)

This feature has no annotations

qs_5_scaffold_1064_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4748..5452)
DNA (705bp) protein (235aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJZ6_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44784.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator HTH domain-containing protein
qs_5_scaffold_1064_8
unknown

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comp(5900..6496)
DNA (597bp) protein (199aa)

This feature has no annotations

qs_5_scaffold_1064_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6565..6720
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M258_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39786.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
small CPxCG-related zinc finger protein
qs_5_scaffold_1064_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6724..7692
DNA (969bp) protein (323aa)
transcription initiation factor iib (tfiib); K03124 transcription initiation factor TFIIB id=24615091 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
transcription initiation factor iib (tfiib)
qs_5_scaffold_1064_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7689..8510
DNA (822bp) protein (274aa)
DNA binding domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6W2_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EMA41532.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ha
DNA binding domain-containing protein
qs_5_scaffold_1064_12
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8641..8946
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MNE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47171.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
qs_5_scaffold_1064_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10357..11172
DNA (816bp) protein (272aa)
Chaperone protein DnaK n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVN1_9EURY
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
molecular chaperone DnaK
qs_5_scaffold_1064_14
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11471..12271)
DNA (801bp) protein (267aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VWF6_9EURY
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ELY41494.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense
enoyl-CoA hydratase/carnithine racemase
qs_5_scaffold_1064_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12428..14287)
DNA (1860bp) protein (620aa)
Ferredoxin domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC00_9EURY
Ferredoxin domain-containing protein {ECO:0000313|EMBL:EMA43271.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
ferredoxin domain-containing protein
qs_5_scaffold_1064_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14400..15710
DNA (1311bp) protein (437aa)
Chaperone protein DnaJ n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJB3_9EURY
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
chaperone protein DnaJ
qs_5_scaffold_1064_17
unknown

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comp(15768..15905)
DNA (138bp) protein (46aa)

This feature has no annotations

qs_5_scaffold_1064_18
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16264..17277)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AX11_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELZ03020.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
qs_5_scaffold_1064_19
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17357..17713)
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HUC0_HALHT
transposase
Transposase {ECO:0000313|EMBL:AHB67640.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
Displaying 19 items

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