ggKbase home page

qs_5_scaffold_145

Search features with annotation key words

Displaying items 1-30 of 42 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_145_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

276..1307
DNA (1032bp) protein (344aa)
Membrane protein n=1 Tax=Halogranum salarium B-1 RepID=J3JET9_9EURY
Membrane protein {ECO:0000313|EMBL:EJN58656.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ribonuclease BN-like protein
qs_5_scaffold_145_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1361..2614
DNA (1254bp) protein (418aa)
TrkA-C domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBV2_9EURY
TrkA-C domain-containing protein {ECO:0000313|EMBL:EMA54150.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailan
TrkA-C domain-containing protein
qs_5_scaffold_145_3
unknown

Not on your lists

3508..3879
DNA (372bp) protein (124aa)

This feature has no annotations

qs_5_scaffold_145_4
unknown

Not on your lists

comp(3890..4447)
DNA (558bp) protein (186aa)

This feature has no annotations

qs_5_scaffold_145_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4545..5336
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHS1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44888.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_5_scaffold_145_6
unknown

Not on your lists

5288..5449
DNA (162bp) protein (54aa)

This feature has no annotations

qs_5_scaffold_145_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5554..6147)
DNA (594bp) protein (198aa)
Transcriptional regulator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQF2_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EMA35797.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 1
phoU; phosphate uptake regulator / ABC transport system regulatory protein
qs_5_scaffold_145_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6087..6599)
DNA (513bp) protein (171aa)
Transcriptional regulator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQF2_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EMA35797.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 1
SpoVT/AbrB domain protein
qs_5_scaffold_145_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6741..7661)
DNA (921bp) protein (307aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
phosphate ABC transporter ATP-binding protein n=1 Tax=Halococcus hamelinensis RepID=UPI00029B163F
phosphate ABC transporter ATP-binding protein
qs_5_scaffold_145_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7679..7891)
DNA (213bp) protein (71aa)
Phosphate ABC transporter permease n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MTF6_HALMO
Phosphate ABC transporter permease {ECO:0000313|EMBL:EMA48014.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhu
phosphate ABC transporter permease
qs_5_scaffold_145_11
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8349..9272)
DNA (924bp) protein (308aa)
Phosphate ABC transporter permease n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MTF6_HALMO
Phosphate ABC transporter permease {ECO:0000313|EMBL:EMA48014.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhu
pstA2; phosphate ABC transporter permease
qs_5_scaffold_145_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9269..10321)
DNA (1053bp) protein (351aa)
Phosphate ABC transporter, inner membrane subunit PstC n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQN7_9EURY
Phosphate ABC transporter, inner membrane subunit PstC {ECO:0000313|EMBL:EMA35801.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
phosphate ABC transporter, inner membrane subunit PstC
qs_5_scaffold_145_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10385..10495)
DNA (111bp) protein (37aa)
Phosphate ABC transporter substrate-binding protein, phot family {ECO:0000313|EMBL:EMA43723.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococc
qs_5_scaffold_145_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10598..11446)
DNA (849bp) protein (283aa)
Phosphate ABC transporter substrate-binding protein, phot family n=2 Tax=Halococcus RepID=M0NGI9_9EURY
Phosphate ABC transporter substrate-binding protein, phot family {ECO:0000313|EMBL:EMA56668.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococc
phosphate ABC transporter substrate-binding protein, phot family
qs_5_scaffold_145_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12330..12755
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J467_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15459.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_5_scaffold_145_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12868..13185)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2A2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28827.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_5_scaffold_145_17
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13332..14288
DNA (957bp) protein (319aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NN31_HALUD
Succinylglutamate desuccinylase/aspartoacylase
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:ACV11431.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halo
qs_5_scaffold_145_18
Haloferax lucentense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14678..15058
DNA (381bp) protein (127aa)
Uncharacterized protein n=3 Tax=Haloferax RepID=D4GYZ2_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ74535.1}; TaxID=1230452 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lucentense (strain DSM
qs_5_scaffold_145_19
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15241..16374
DNA (1134bp) protein (378aa)
Threonine synthase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5B6_HALJB
threonine synthase
Threonine synthase {ECO:0000313|EMBL:ADJ13697.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (st
qs_5_scaffold_145_20
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16404..17741)
DNA (1338bp) protein (446aa)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};;
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D4Z9_HALXS
hypothetical protein
qs_5_scaffold_145_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17998..18960
DNA (963bp) protein (321aa)
Putative HTH-type transcriptional regulatory protein C450_04057 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCA8_9EURY
Putative HTH-type transcriptional regulatory protein C450_04057 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
hypothetical protein
qs_5_scaffold_145_22
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19678..21012
DNA (1335bp) protein (445aa)
Major facilitator family hexuronate transporter n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JKI2_9EURY
Major facilitator family hexuronate transporter {ECO:0000313|EMBL:EMA08484.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
tp14; major facilitator family hexuronate transporter
qs_5_scaffold_145_23
Heliobacillus mobilis, Heliobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21103..21879)
DNA (777bp) protein (259aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|SAAS:SAAS00094725};; Flags: Fragment;; TaxID=28064 species="Bacteria; Firmicutes; Clostridia;
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000370BBA8
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
qs_5_scaffold_145_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22047..24203
DNA (2157bp) protein (719aa)
UvrABC system protein B n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAW0_9EURY
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
UvrABC system protein B
qs_5_scaffold_145_25
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24285..25076)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IJ85_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ95928.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
qs_5_scaffold_145_26
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25206..25508
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A3J8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59973.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_5_scaffold_145_27
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25656..26858)
DNA (1203bp) protein (401aa)
Putative stomatin/prohibitin-family membrane protease subunit YbbK n=2 Tax=Halarchaeum acidiphilum RepID=U2YXP2_9EURY
Putative stomatin/prohibitin-family membrane protease subunit YbbK {ECO:0000313|EMBL:GAD53805.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" sour
hypothetical protein
qs_5_scaffold_145_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27012..27941)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NES0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55190.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_5_scaffold_145_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28142..28615)
DNA (474bp) protein (158aa)
Ferritin Dps family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKK3_9EURY
Ferritin Dps family protein {ECO:0000313|EMBL:EMA44965.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
dpsA2; ferritin / Dps domain protein
qs_5_scaffold_145_30
unknown

Not on your lists

comp(29105..29317)
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying items 1-30 of 42 in total

View Taxonomy