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qs_5_scaffold_235

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_235_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..204
DNA (204bp) protein (68aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021};; TaxID=797209 species="Archaea; Eur
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXT3_9EURY
qs_5_scaffold_235_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

207..1361
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGN2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44493.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_5_scaffold_235_3
unknown

Not on your lists

1625..1879
DNA (255bp) protein (85aa)

This feature has no annotations

qs_5_scaffold_235_4
unknown

Not on your lists

2393..2749
DNA (357bp) protein (119aa)

This feature has no annotations

qs_5_scaffold_235_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3100..3936
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAC3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54927.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_5_scaffold_235_6
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4384..5256
DNA (873bp) protein (291aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MDT4_HALMO
ribose-phosphate pyrophosphokinase
qs_5_scaffold_235_7
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5387..8752)
DNA (3366bp) protein (1122aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1495067 species="Archaea; E
Isoleucine--tRNA ligase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5G2_9EURY
isoleucyl-tRNA synthetase
qs_5_scaffold_235_8
unknown

Not on your lists

comp(8915..9067)
DNA (153bp) protein (51aa)

This feature has no annotations

qs_5_scaffold_235_9
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9904..10413
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZGP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY85231.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
hypothetical protein
qs_5_scaffold_235_10
unknown

Not on your lists

10410..10850
DNA (441bp) protein (147aa)

This feature has no annotations

qs_5_scaffold_235_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10959..11624
DNA (666bp) protein (222aa)
Uracil-DNA glycosylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYA3_9EURY
Uracil-DNA glycosylase {ECO:0000313|EMBL:ELZ28200.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
uracil-DNA glycosylase
qs_5_scaffold_235_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11654..12694)
DNA (1041bp) protein (347aa)
glycosyl transferase family 2 n=1 Tax=Haladaptatus paucihalophilus RepID=UPI000375D28A
Glycosyl transferase family 2 {ECO:0000313|EMBL:EFW93129.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauciha
family 2 glycosyl transferase
qs_5_scaffold_235_13
unknown

Not on your lists

comp(12687..12848)
DNA (162bp) protein (54aa)

This feature has no annotations

qs_5_scaffold_235_14
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13168..13920)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6Q4_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13931.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_5_scaffold_235_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14135..15403)
DNA (1269bp) protein (423aa)
Polysaccharide deacetylase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JID4_9EURY
Polysaccharide deacetylase {ECO:0000313|EMBL:EMA50074.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
polysaccharide deacetylase
qs_5_scaffold_235_16

Not on your lists

15617..16303
DNA (687bp) protein (229aa)
2-haloalkanoic acid dehalogenase, type II n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y3J4_9ARCH
2-haloalkanoic acid dehalogenase, type II {ECO:0000313|EMBL:ESS05587.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
haloacid dehalogenase, type II
qs_5_scaffold_235_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16420..16845
DNA (426bp) protein (142aa)
Histidine triad protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDP2_9EURY
Histidine triad protein {ECO:0000313|EMBL:EMA43866.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
histidine triad (HIT) protein
qs_5_scaffold_235_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16993..17859
DNA (867bp) protein (289aa)
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAB5_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
transcription initiation factor iib (tfiib)
qs_5_scaffold_235_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18016..20109)
DNA (2094bp) protein (698aa)
MCM family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8X7_9EURY
MCM family protein {ECO:0000313|EMBL:EMA53105.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 135
MCM family protein
qs_5_scaffold_235_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20218..21081)
DNA (864bp) protein (288aa)
cyoC; cytochrome c oxidase polypeptide III (EC:1.9.3.1)
Cox-type terminal oxidase subunit III n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXZ8_9EURY
Cox-type terminal oxidase subunit III {ECO:0000313|EMBL:EMA49300.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
qs_5_scaffold_235_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21205..21498
DNA (294bp) protein (98aa)
DNA-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CI64_9EURY
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:ELZ22333.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
qs_5_scaffold_235_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21626..21919)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCV3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54919.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_5_scaffold_235_trna_1
unknown

Not on your lists

22100..22172
DNA (73bp)
transferRNA
Displaying 23 items

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