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qs_5_scaffold_260

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_260_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..260
DNA (258bp) protein (86aa)
Integrase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MNN5_HALMO
Integrase {ECO:0000313|EMBL:EMA47317.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
integrase
qs_5_scaffold_260_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

272..427
DNA (156bp) protein (52aa)
Small CPxCG-related zinc finger protein n=2 Tax=Halococcus RepID=M0MS26_9EURY
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:EMA52685.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
hypothetical protein
qs_5_scaffold_260_3
Pyrobaculum arsenaticum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

624..830
DNA (207bp) protein (69aa)
DNA polymerase, beta domain protein region {ECO:0000313|EMBL:ABP49865.1}; TaxID=340102 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobacu
qs_5_scaffold_260_4
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1232..2464
DNA (1233bp) protein (411aa)
ABC transporter substrate-binding protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GZP4_9EURY
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ76977.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lars
ThiB subfamily ABC transporter periplasmic binding protein
qs_5_scaffold_260_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2461..4332
DNA (1872bp) protein (624aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP59_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ23664.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
ABC transporter
qs_5_scaffold_260_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4334..5503
DNA (1170bp) protein (390aa)
ABC transporter n=1 Tax=Halogranum salarium B-1 RepID=J3A3H7_9EURY
ABC transporter {ECO:0000313|EMBL:EJN59943.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ABC transporter
qs_5_scaffold_260_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5603..6283)
DNA (681bp) protein (227aa)
probable S-adenosylmethionine-dependent methyltransferase (homolog to 24-sterol C-methyltransferase) (EC:2.1.1.-)
S-adenosylmethionine-dependent methyltransferase 3 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M593_9EURY
S-adenosylmethionine-dependent methyltransferase 3 {ECO:0000313|EMBL:EMA40977.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
qs_5_scaffold_260_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6668..7117
DNA (450bp) protein (150aa)
Conserved hypothetical membrane protein (DUF2391) n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPZ1_9EURY
conserved hypothetical membrane protein (DUF2391)
Conserved hypothetical membrane protein (DUF2391) {ECO:0000313|EMBL:CCQ34114.1}; Putative integral membrane protein {ECO:0000313|EMBL:ERJ07337.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Haloba
qs_5_scaffold_260_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7219..7797
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42754.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_5_scaffold_260_10
unknown

Not on your lists

7896..8528
DNA (633bp) protein (211aa)

This feature has no annotations

qs_5_scaffold_260_11
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8651..9436)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MG40_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA44323.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_5_scaffold_260_12
unknown

Not on your lists

comp(9436..9525)
DNA (90bp) protein (30aa)

This feature has no annotations

qs_5_scaffold_260_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9630..11126)
DNA (1497bp) protein (499aa)
MATE efflux family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYA0_9EURY
MATE efflux family protein
DNA damage-inducible protein {ECO:0000313|EMBL:ERJ05362.1}; MATE efflux family protein {ECO:0000313|EMBL:CCQ33632.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qs_5_scaffold_260_14
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11296..12417)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XVW7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY65551.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
qs_5_scaffold_260_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12422..12850)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBG8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42693.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_5_scaffold_260_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12854..13486)
DNA (633bp) protein (211aa)
GTP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MA72_9EURY
GTP-binding protein {ECO:0000313|EMBL:EMA42692.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
small GTP-binding protein domain
qs_5_scaffold_260_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14412..16226
DNA (1815bp) protein (605aa)
ORC1-type DNA replication protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1F2_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
orc1/cdc6 family replication initiation protein
qs_5_scaffold_260_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16423..17583
DNA (1161bp) protein (387aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2X8_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA39758.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase/reductase SDR
qs_5_scaffold_260_19
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17435..18151)
DNA (717bp) protein (239aa)
Signal peptidase I n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3ACT1_9EURY
Signal peptidase I {ECO:0000313|EMBL:GAD52583.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sec11a; signal sequence peptidase
qs_5_scaffold_260_20
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18251..19918
DNA (1668bp) protein (556aa)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=931277 species="Archaea; Euryar
DNA polymerase ii small subunit (EC:2.7.7.7)
DNA polymerase II small subunit n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MEZ1_HALMO
qs_5_scaffold_260_21
unknown

Not on your lists

20064..20651
DNA (588bp) protein (196aa)

This feature has no annotations

qs_5_scaffold_260_22
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20871..21728
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BNZ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ12565.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
qs_5_scaffold_260_23
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21766..22050)
DNA (285bp) protein (95aa)
Leucyl aminopeptidase (Aminopeptidase T) n=1 Tax=Natronococcus occultus SP4 RepID=L0JUP6_9EURY
leucyl aminopeptidase (aminopeptidase T)
Leucyl aminopeptidase (Aminopeptidase T) {ECO:0000313|EMBL:AGB36015.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus
Displaying 23 items

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