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qs_5_scaffold_32

Search features with annotation key words

Displaying items 1-30 of 53 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_32_1
unknown

Not on your lists

3..92
DNA (90bp) protein (30aa)

This feature has no annotations

qs_5_scaffold_32_2
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(243..1250)
DNA (1008bp) protein (336aa)
mRNA 3'-end processing factor n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WWR2_9EURY
mRNA 3'-end processing factor {ECO:0000313|EMBL:ELY53919.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolytic
hypothetical protein
qs_5_scaffold_32_3
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1371..3299)
DNA (1929bp) protein (643aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
DNA ligase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WXK5_9EURY
ATP-dependent DNA ligase i
qs_5_scaffold_32_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3459..4340)
DNA (882bp) protein (294aa)
Cytochrome c oxidase subunit II n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFQ3_9EURY
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:EMA44208.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
cytochrome c oxidase subunit II
qs_5_scaffold_32_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4485..5939
DNA (1455bp) protein (485aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
ctaB; protoheme IX geranylgeranyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MT84_9EURY
qs_5_scaffold_32_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6030..6461
DNA (432bp) protein (144aa)
Ntp pyrophosphohydrolase n=1 Tax=Halogranum salarium B-1 RepID=J2ZL60_9EURY
Ntp pyrophosphohydrolase {ECO:0000313|EMBL:EJN61480.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
NUDIX hydrolase
qs_5_scaffold_32_7
unknown

Not on your lists

comp(6466..6594)
DNA (129bp) protein (43aa)

This feature has no annotations

qs_5_scaffold_32_8
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6967..7377
DNA (411bp) protein (137aa)
Prefoldin subunit beta n=1 Tax=Natronococcus occultus SP4 RepID=L0JWZ4_9EURY
prefoldin, beta subunit, archaeal
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae;
qs_5_scaffold_32_9
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7384..7680
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A3T6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY92532.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
hypothetical protein
qs_5_scaffold_32_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7755..8867
DNA (1113bp) protein (371aa)
Peptidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY40_9EURY
Peptidase {ECO:0000313|EMBL:EMA50642.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
peptidase family protein
qs_5_scaffold_32_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9139..10143
DNA (1005bp) protein (335aa)
ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME56_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA44037.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
multidrug ABC transporter ATPase
qs_5_scaffold_32_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10211..10999
DNA (789bp) protein (263aa)
ABC transporter n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MA12_9EURY
ABC transporter {ECO:0000313|EMBL:EMA41464.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
ABC transporter
qs_5_scaffold_32_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11172..11630
DNA (459bp) protein (153aa)
Periplasmic copper-binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT76_9EURY
Periplasmic copper-binding protein {ECO:0000313|EMBL:EFW91805.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pa
qs_5_scaffold_32_14
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

11965..13926
DNA (1962bp) protein (654aa)
Adenine-specific DNA methylase containing a Zn-ribbon n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DYA1_METI4
adenine-specific DNA methylase containing a Zn-ribbon
Adenine-specific DNA methylase containing a Zn-ribbon {ECO:0000313|EMBL:ACD82378.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphil
qs_5_scaffold_32_15
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

13926..18194
DNA (4269bp) protein (1423aa)
Superfamily I DNA and RNA helicases and helicase subunits-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV29_RUBXD
superfamily I DNA/RNA helicase
Superfamily I DNA and RNA helicases and helicase subunits-like protein {ECO:0000313|EMBL:ABG04749.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae;
qs_5_scaffold_32_trna_1
unknown

Not on your lists

comp(18316..18386)
DNA (71bp)
transferRNA
qs_5_scaffold_32_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18471..19121)
DNA (651bp) protein (217aa)
Methyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M3P7_HALMO
Methyltransferase {ECO:0000313|EMBL:EMA40437.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
methyltransferase type 11
qs_5_scaffold_32_17
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19262..19531)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YW28_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD52987.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
type II secretion system F domain protein
qs_5_scaffold_32_18
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19528..20934)
DNA (1407bp) protein (469aa)
Type II secretion system protein E n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBQ2_HALXS
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:AEH38320.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (s
qs_5_scaffold_32_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21201..21671
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49214.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_5_scaffold_32_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21827..22390)
DNA (564bp) protein (188aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N725_9EURY
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA53666.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
membrane-bound metal-dependent hydrolase
qs_5_scaffold_32_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22550..24268
DNA (1719bp) protein (573aa)
Phosphomannomutase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MV54_9EURY
Phosphomannomutase {ECO:0000313|EMBL:EMA49213.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
qs_5_scaffold_32_22
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24589..25020
DNA (432bp) protein (144aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGF4_9EURY
Cytidine deaminase {ECO:0000313|EMBL:ELZ34561.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14
qs_5_scaffold_32_23
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25017..25895
DNA (879bp) protein (293aa)
udp1; uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase {ECO:0000313|EMBL:ADE03687.1}; EC=2.4.2.3 {ECO:0000313|EMBL:ADE03687.1};; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;"
Uridine phosphorylase n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0IEB6_9EURY
qs_5_scaffold_32_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26080..27234)
DNA (1155bp) protein (385aa)
NADH dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY21_9EURY
NADH dehydrogenase {ECO:0000313|EMBL:EMA49320.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
NADH dehydrogenase, FAD-containing subunit
qs_5_scaffold_32_25
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27576..28100)
DNA (525bp) protein (175aa)
Transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4Y0_HALJB
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:ELY36325.1}; Uncharacterized protein {ECO:0000313|EMBL:ADJ15597.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
qs_5_scaffold_32_26

Not on your lists

28255..29169
DNA (915bp) protein (305aa)
NAD-dependent epimerase/dehydratase n=1 Tax=halophilic archaeon DL31 RepID=G2ML17_9ARCH
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEN05418.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_5_scaffold_32_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29365..30252
DNA (888bp) protein (296aa)
Arginase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDL9_9EURY
Arginase {ECO:0000313|EMBL:EMA55653.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
arginase
qs_5_scaffold_32_28
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(30450..33056)
DNA (2607bp) protein (869aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" so
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Halogranum salarium B-1 RepID=J2ZKG9_9EURY
qs_5_scaffold_32_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33170..35083)
DNA (1914bp) protein (638aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1227455 species="Archaea; Eu
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ91_9EURY
Displaying items 1-30 of 53 in total

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