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qs_5_scaffold_454

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_454_1
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(714..2306)
DNA (1593bp) protein (531aa)
Sodium-solute symporter putative n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JFH2_HALVA
Sodium-solute symporter putative {ECO:0000313|EMBL:EMA06754.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismo
putP-2; sodium-solute symporter
qs_5_scaffold_454_2
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2440..3165)
DNA (726bp) protein (242aa)
Putative transcription activator n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NU74_HALBP
putative transcription activator
Putative transcription activator {ECO:0000313|EMBL:ADQ68594.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum bo
qs_5_scaffold_454_3
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3162..3824)
DNA (663bp) protein (221aa)
Transcriptional activator, TenA family protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F034_9EURY
Transcriptional activator, TenA family protein {ECO:0000313|EMBL:ELZ53325.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
tenA2; thiamine biosynthesis/salvage protein TenA
qs_5_scaffold_454_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3996..4289
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA47546.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qs_5_scaffold_454_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4349..5668)
DNA (1320bp) protein (440aa)
ABC transporter ATP-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N409_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA52672.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
ABC transporter
qs_5_scaffold_454_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5665..6768)
DNA (1104bp) protein (368aa)
ABC-type vitamin B12 transporter, permease component BtuC n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFG2_9EURY
btuC; ABC-type vitamin B12 transporter, permease component BtuC
ABC-type vitamin B12 transporter, permease component BtuC {ECO:0000313|EMBL:CCQ34377.1}; Cobalamin import system permease protein BtuC {ECO:0000313|EMBL:ERJ06063.1}; TaxID=1033806 species="Archaea; Eu
qs_5_scaffold_454_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6831..8162
DNA (1332bp) protein (444aa)
Periplasmic binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ26_9EURY
Periplasmic binding protein {ECO:0000313|EMBL:EMA38822.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
periplasmic binding protein
qs_5_scaffold_454_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8306..8584
DNA (279bp) protein (93aa)
Signal recognition particle 19 kDa protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSZ1_9EURY
Signal recognition particle 19 kDa protein {ECO:0000256|HAMAP-Rule:MF_00305}; Short=SRP19 {ECO:0000256|HAMAP-Rule:MF_00305};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
signal recognition particle 19 kDa protein
qs_5_scaffold_454_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8673..8903
DNA (231bp) protein (77aa)
H/ACA RNA-protein complex component Gar1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N459_9EURY
H/ACA RNA-protein complex component Gar1 {ECO:0000313|EMBL:EMA52651.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
gar1; tRNA/rRNA pseudouridine synthase complex protein Gar1
qs_5_scaffold_454_10
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8921..10258
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NJF7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH98666.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
qs_5_scaffold_454_11
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10341..11582
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XKE2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY62205.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
qs_5_scaffold_454_12
unknown

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11614..11880
DNA (267bp) protein (89aa)

This feature has no annotations

qs_5_scaffold_454_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12006..12839)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MA07_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41459.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_5_scaffold_454_14
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(13042..14112)
DNA (1071bp) protein (357aa)
ocd1; ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DHN5_9EURY
Ornithine cyclodeaminase {ECO:0000313|EMBL:ELZ34991.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
qs_5_scaffold_454_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14331..14990
DNA (660bp) protein (220aa)
aglD; glycosyltransferase AglD (EC:2.4.1.-)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGT1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44937.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qs_5_scaffold_454_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14987..16096
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGT1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44937.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
glycosyl transferase
qs_5_scaffold_454_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16543..17520
DNA (978bp) protein (326aa)
Transcription initiation factor IIB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1P5_HALMD
transcription factor TFIIB cyclin-related protein
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qs_5_scaffold_454_18
unknown

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comp(17452..17583)
DNA (132bp) protein (44aa)

This feature has no annotations

qs_5_scaffold_454_19
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17740..18213
DNA (474bp) protein (158aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MFR6_HALMO
3-dehydroquinate dehydratase
Displaying 19 items

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